2RAD | pdb_00002rad

Crystal structure of the succinoglycan biosynthesis protein. Northeast structural Genomics Consortium target BcR135

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d2radb_	Alpha and beta proteins (a/b)	EreA/ChaN-like	EreA/ChaN-like	EreA-like	Succinoglycan biosynthesis protein BC3120	(Bacillus cereus ATCC 14579 ) [TaxId: 226900 ],	SCOPe (2.08)
A	d2rada1	Alpha and beta proteins (a/b)	EreA/ChaN-like	EreA/ChaN-like	EreA-like	Succinoglycan biosynthesis protein BC3120	(Bacillus cereus ATCC 14579 ) [TaxId: 226900 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	EreA/ChaN-like	8038810	3000873	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	EreA/ChaN-like	8038810	3000873	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Erythro_esteras	e2radB1	A: a/b three-layered sandwiches	X: EreA/ChaN-like (From Topology)	H: EreA/ChaN-like (From Topology)	T: EreA/ChaN-like	F: Erythro_esteras	ECOD (1.6)
A	Erythro_esteras	e2radA1	A: a/b three-layered sandwiches	X: EreA/ChaN-like (From Topology)	H: EreA/ChaN-like (From Topology)	T: EreA/ChaN-like	F: Erythro_esteras	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.1660.10	Alpha Beta	3-Layer(aba) Sandwich	EreA/ChaN-like fold	EreA-like (biosynthetic domain)	CATH (4.2.0)
B	3.30.1870.10	Alpha Beta	2-Layer Sandwich	EreA/ChaN-like, small alpha-beta sandwich	EreA-like	CATH (4.2.0)
B	1.20.1440.30	Mainly Alpha	Up-down Bundle	de novo design (two linked rop proteins)	Biosynthetic Protein domain	CATH (4.2.0)
A	3.40.1660.10	Alpha Beta	3-Layer(aba) Sandwich	EreA/ChaN-like fold	EreA-like (biosynthetic domain)	CATH (4.2.0)
A	3.30.1870.10	Alpha Beta	2-Layer Sandwich	EreA/ChaN-like, small alpha-beta sandwich	EreA-like	CATH (4.2.0)
A	1.20.1440.30	Mainly Alpha	Up-down Bundle	de novo design (two linked rop proteins)	Biosynthetic Protein domain	CATH (4.2.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF05139	Erythromycin esterase (Erythro_esteras)	Erythromycin esterase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Succinoglycan biosynthesis protein	cation binding ion binding binding metal ion binding small molecule binding	response to stimulus response to chemical response to antibiotic	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR052036	Hydrolase/Phosphoribosyltransferase-associated	Family
A, B	IPR007815	Erythromycin esterase	Family
A, B	IPR014622	Uncharacterised conserved protein UCP036794, erythromycin esterase-type	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.