Crystal structure of the N-terminal part of the bacterial S-layer protein SbsC
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | EUF07722 | e2ra1A5 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: EUF07722 | ECOD (1.6) |
| A | Big_5_like | e2ra1A4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Big_5_like | ECOD (1.6) |
| A | EUF08119 | e2ra1A1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat (From Topology) | T: Spectrin repeat | F: EUF08119 | ECOD (1.6) |
| A | EUF08120 | e2ra1A2 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat (From Topology) | T: Spectrin repeat | F: EUF08120 | ECOD (1.6) |
| A | EUF08121 | e2ra1A3 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat (From Topology) | T: Spectrin repeat | F: EUF08121 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.20.58.790 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.2.0) |
| A | 1.20.58.780 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.2.0) |
| A | 1.20.58.770 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.2.0) |
| A | 2.60.40.1220 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.2.0) | |
| A | 2.60.40.2120 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.2.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Surface layer protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR041378 | SbsC C-terminal domain | Domain | |
| IPR054605 | S-layer protein, spectrin-like repeat | Domain | |
| IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
| IPR014755 | Copper resistance protein CopC/internalin, immunoglobulin-like | Homologous Superfamily | |
| IPR032812 | SbsA, Ig-like domain | Domain | |
| IPR003343 | Bacterial Ig-like domain, group 2 | Domain | |
| IPR040751 | S-layer protein SbsC, C-terminal domain | Domain |
