2R1F | pdb_00002r1f

Crystal structure of predicted aminodeoxychorismate lyase from Escherichia coli

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	LysM domain-like	8091105	3001938	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Germination-specific lytic tansglycosylase SleB, catalytic domain-like	8091111	3002487	SCOP2B (2022-06-29)
A	SCOP2 Family	YceG, N-terminal domain-like	8050653	4006990	SCOP2 (2022-06-29)
A	SCOP2 Family	YceG, C-terminal domain-like	8091109	4007724	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	LysM domain-like	8091105	3001938	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Germination-specific lytic tansglycosylase SleB, catalytic domain-like	8091111	3002487	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	JmjC,JmjN	e2r1fB3	A: a/b three-layered sandwiches	X: Transmembrane heme-binding four-helical bundle	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: JmjC,JmjN	ECOD (v294.1)
A	Sulfotransfer_3	e2r1fA1	A: a/b three-layered sandwiches	X: Long alpha-hairpin	H: C-terminal UvrC-binding domain of UvrB	T: C-terminal UvrC-binding domain of UvrB	F: Sulfotransfer_3	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.30.160.60	Alpha Beta	2-Layer Sandwich	Double Stranded RNA Binding Domain	Classic Zinc Finger	CATH (4.3.0)
A	3.30.160.60	Alpha Beta	2-Layer Sandwich	Double Stranded RNA Binding Domain	Classic Zinc Finger	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Predicted aminodeoxychorismate lyase	peptidoglycan lytic transglycosylase activity peptidoglycan muralytic activity lytic endotransglycosylase activity lyase activity catalytic activity carbon-oxygen lyase activity, acting on polysaccharides carbon-oxygen lyase activity	glycosaminoglycan metabolic process aminoglycan metabolic process peptidoglycan metabolic process carbohydrate derivative metabolic process metabolic process cellular process macromolecule metabolic process carbohydrate derivative biosynthetic process peptidoglycan-based cell wall biogenesis cell wall organization or biogenesis macromolecule biosynthetic process cellular component biogenesis peptidoglycan biosynthetic process cell wall biogenesis glycosaminoglycan metabolic process aminoglycan metabolic process peptidoglycan metabolic process carbohydrate derivative metabolic process metabolic process cellular process macromolecule metabolic process carbohydrate derivative biosynthetic process peptidoglycan-based cell wall biogenesis cell wall organization or biogenesis macromolecule biosynthetic process cellular component biogenesis peptidoglycan biosynthetic process cell wall biogenesis biosynthetic process cell wall macromolecule biosynthetic process aminoglycan biosynthetic process glycosaminoglycan biosynthetic process cellular component organization or biogenesis cell wall macromolecule metabolic process cellular component organization cell wall organization external encapsulating structure organization	cell periphery cellular anatomical structure plasma membrane membrane extracellular region outer membrane-bounded periplasmic space cell envelope periplasmic space

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR003770	Endolytic murein transglycosylase	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.