2QU7
Crystal structure of a putative transcription regulator from Staphylococcus saprophyticus subsp. saprophyticus
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2qu7a_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like I | Periplasmic binding protein-like I | automated matches | automated matches | (Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292 ) [TaxId: 342451 ], | SCOPe (2.08) |
B | d2qu7b_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like I | Periplasmic binding protein-like I | automated matches | automated matches | (Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292 ) [TaxId: 342451 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Peripla_BP_3 | e2qu7A2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: Peripla_BP_3 | ECOD (1.6) |
A | Peripla_BP_1_1st_1 | e2qu7A3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: Peripla_BP_1_1st_1 | ECOD (1.6) |
B | Peripla_BP_3 | e2qu7B2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: Peripla_BP_3 | ECOD (1.6) |
B | Peripla_BP_1_1st_1 | e2qu7B3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: Peripla_BP_1_1st_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.2300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Response regulator | CATH (4.3.0) |
B | 3.40.50.2300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Response regulator | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13407 | Periplasmic binding protein domain (Peripla_BP_4) | Periplasmic binding protein domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Putative transcriptional regulator |
| - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001387 | Cro/C1-type helix-turn-helix domain | Domain | |
IPR025997 | Periplasmic binding protein | Domain | |
IPR000843 | LacI-type HTH domain | Domain | |
IPR028082 | Periplasmic binding protein-like I | Homologous Superfamily | |
IPR010982 | Lambda repressor-like, DNA-binding domain superfamily | Homologous Superfamily |