2QQ8 | pdb_00002qq8

Crystal structure of the putative RabGAP domain of human TBC1 domain family member 14

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	RabGAP-TBC_N	e2qq8A3	A: alpha arrays	X: Ypt/Rab-GAP domain of gyp1p-like	H: Ypt/Rab-GAP domain of gyp1p (From Topology)	T: Ypt/Rab-GAP domain of gyp1p	F: RabGAP-TBC_N	ECOD (1.6)
A	RabGAP-TBC_C_1	e2qq8A2	A: alpha arrays	X: Ypt/Rab-GAP domain of gyp1p-like	H: Ypt/Rab-GAP domain of gyp1p (From Topology)	T: Ypt/Rab-GAP domain of gyp1p	F: RabGAP-TBC_C_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.10.750	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Ypt/Rab-GAP domain of gyp1p, domain 1	CATH (4.3.0)
A	1.10.8.270	Mainly Alpha	Orthogonal Bundle	Helicase, Ruva Protein	domain 3	CATH (4.3.0)
A	1.10.472.80	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00566	Rab-GTPase-TBC domain (RabGAP-TBC)	Rab-GTPase-TBC domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	TBC1 domain family member 14	protein binding binding kinase binding enzyme binding protein kinase binding GTPase regulator activity enzyme regulator activity enzyme activator activity GTPase activator activity molecular function activator activity nucleoside-triphosphatase regulator activity molecular function regulator activity	catabolic process regulation of cellular component organization regulation of cellular process macroautophagy autophagy autophagosome organization cellular component biogenesis cellular component organization cellular component assembly cellular component organization or biogenesis process utilizing autophagic mechanism regulation of biological process autophagosome assembly organelle assembly catabolic process regulation of cellular component organization regulation of cellular process macroautophagy autophagy autophagosome organization cellular component biogenesis cellular component organization cellular component assembly cellular component organization or biogenesis process utilizing autophagic mechanism regulation of biological process autophagosome assembly organelle assembly vacuole organization regulation of autophagosome assembly biological regulation regulation of vacuole organization regulation of cellular component biogenesis regulation of organelle organization organelle organization regulation of organelle assembly cellular process metabolic process negative regulation of catabolic process negative regulation of metabolic process negative regulation of biological process regulation of catabolic process regulation of autophagy negative regulation of autophagy negative regulation of cellular process regulation of metabolic process cellular localization transport intracellular transport establishment of localization vesicle-mediated transport endosomal transport localization cytosolic transport retrograde transport, endosome to Golgi establishment of localization in cell recycling endosome to Golgi transport Golgi vesicle transport	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle vacuole autophagosome cytoplasm intracellular membrane-bounded organelle Golgi apparatus endomembrane system endosome intracellular vesicle recycling endosome membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle vacuole autophagosome cytoplasm intracellular membrane-bounded organelle Golgi apparatus endomembrane system endosome intracellular vesicle recycling endosome cytoplasmic vesicle vesicle cytosol nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR050302	Rab GTPase-activating TBC domain-containing protein	Family
A	IPR035969	Rab-GAP-TBC domain superfamily	Homologous Superfamily
A	IPR000195	Rab-GAP-TBC domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q9P2M4	ovarian cancer tuberculosis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.