2Q5X | pdb_00002q5x

Crystal Structure of the C-terminal domain of hNup98


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyNup98 autoproteolytic domain-like 8091406 4007737 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyZU5 domain-like 8091407 3002026 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ANucleoporin2e2q5xA1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related (From Topology)T: ZU5/Nup98-C/GAIN-B autoproteolytic domain-relatedF: Nucleoporin2ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.1610.10 Alpha Beta 2-Layer Sandwich c-terminal autoproteolytic domain of nucleoporin nup98 Peptidase S59, nucleoporinCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF04096Nup98-96 autopeptidase S59 (Nucleoporin2)Nup98-96 autopeptidase S59The nuclear pore complex protein plays a role in bidirectional transport across the nucleoporin complex in nucleocytoplasmic transport. The mammalian nuclear pore complex (NPC) is comprised of approximately 30 unique proteins, collectively known as n ...The nuclear pore complex protein plays a role in bidirectional transport across the nucleoporin complex in nucleocytoplasmic transport. The mammalian nuclear pore complex (NPC) is comprised of approximately 30 unique proteins, collectively known as nucleoporins [2]. This entry includes yeast family members such as Nup145p as well as vertebrate Nup98. The NUP C-terminal domains of Nup98 and Nup145 possess peptidase S59 autoproteolytic activity. The autoproteolytic sites of Nup98 and Nup145 each occur immediately C-terminal to the NUP C-terminal domain. Thus, although this domain occurs in the middle of each precursor polypeptide, it winds up at the C-terminal end of the N-terminal cleavage product. Cleavage of the peptide chains are necessary for the proper targeting to the nuclear pore [3].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Nuclear pore complex protein Nup98