Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
G [auth A]SCOP2B SuperfamilyNucleotide cyclase/DNA polymerase palm domain-like 8036151 3001272 SCOP2B (2022-06-29)
G [auth A]SCOP2B SuperfamilyRibonuclease H-like 8036150 3000143 SCOP2B (2022-06-29)
G [auth A]SCOP2B SuperfamilyNucleotide cyclase/DNA polymerase palm domain-like 8036151 3001272 SCOP2B (2022-06-29)
H [auth B]SCOP2B SuperfamilyNucleotide cyclase/DNA polymerase palm domain-like 8036151 3001272 SCOP2B (2022-06-29)
H [auth B]SCOP2B SuperfamilyRibonuclease H-like 8036150 3000143 SCOP2B (2022-06-29)
H [auth B]SCOP2B SuperfamilyNucleotide cyclase/DNA polymerase palm domain-like 8036151 3001272 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
G [auth A]DNA_pol_B_2_3rde2pyjA1 A: alpha bundlesX: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology)H: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology)T: fingers domain in bacteriophage RB69-like DNA polymerase IF: DNA_pol_B_2_3rdECOD (1.6)
G [auth A]PHA02563e2pyjA2 A: a+b two layersX: Alpha-beta plaitsH: Adenylyl and guanylyl cyclase catalytic domain-likeT: Adenylyl and guanylyl cyclase catalytic domain-likeF: PHA02563ECOD (1.6)
G [auth A]DNA_pol_B_2_2nde2pyjA3 A: a+b complex topologyX: insertion domain in bacteriophage phi29 DNA polymerase (From Topology)H: insertion domain in bacteriophage phi29 DNA polymerase (From Topology)T: insertion domain in bacteriophage phi29 DNA polymeraseF: DNA_pol_B_2_2ndECOD (1.6)
G [auth A]DNA_pol_B_2_1ste2pyjA4 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: DNA_pol_B_2_1stECOD (1.6)
H [auth B]DNA_pol_B_2_3rde2pyjB1 A: alpha bundlesX: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology)H: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology)T: fingers domain in bacteriophage RB69-like DNA polymerase IF: DNA_pol_B_2_3rdECOD (1.6)
H [auth B]PHA02563e2pyjB2 A: a+b two layersX: Alpha-beta plaitsH: Adenylyl and guanylyl cyclase catalytic domain-likeT: Adenylyl and guanylyl cyclase catalytic domain-likeF: PHA02563ECOD (1.6)
H [auth B]DNA_pol_B_2_2nde2pyjB3 A: a+b complex topologyX: insertion domain in bacteriophage phi29 DNA polymerase (From Topology)H: insertion domain in bacteriophage phi29 DNA polymerase (From Topology)T: insertion domain in bacteriophage phi29 DNA polymeraseF: DNA_pol_B_2_2ndECOD (1.6)
H [auth B]DNA_pol_B_2_1ste2pyjB4 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: DNA_pol_B_2_1stECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G [auth A],
H [auth B]
PF03175DNA polymerase type B, organellar and viral (DNA_pol_B_2)DNA polymerase type B, organellar and viral- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth X],
C [auth Q],
F [auth J]
5'-d(GACTGCTTA(DOC)-3'---
B [auth Y],
D [auth R],
E [auth K]
5'-d(ACACGTAAGCAGTC)-3'---
G [auth A],
H [auth B]
DNA polymerase -