2PYH | pdb_00002pyh

Azotobacter vinelandii Mannuronan C-5 epimerase AlgE4 A-module complexed with mannuronan trisaccharide

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be2pyhB1 A: HTHX: HTHH: tetra-helical, lambda repressor-likeT: Alginate_lyase2F:ECOD (20:10:01)
Ae2pyhA1 A: HTHX: HTHH: tetra-helical, lambda repressor-likeT: Alginate_lyase2F:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-likeCATH (4.3.0)
A2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-likeCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Poly(beta-D-mannuronate) C5 epimerase 4

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR012334Pectin lyase foldHomologous Superfamily
A, B
IPR051550SCF Complex Subunits and Alginate EpimerasesFamily
A, B
IPR001343RTX calcium-binding nonapeptide repeatRepeat
A, B
IPR039448Right handed beta helix domainDomain
A, B
IPR006633Carbohydrate-binding/sugar hydrolysis domainDomain
A, B
IPR006626Parallel beta-helix repeatRepeat
A, B
IPR018511Hemolysin-type calcium-binding conserved siteConserved Site
A, B
IPR011049Serralysin-like metalloprotease, C-terminalHomologous Superfamily
A, B
IPR024535Rhamnogalacturonase A/B/Epimerase-like, pectate lyase domainDomain
A, B
IPR011050Pectin lyase fold/virulence factorHomologous Superfamily