2POZ | pdb_00002poz

Crystal structure of a putative dehydratase from Mesorhizobium loti

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H	d2pozh2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	automated matches	automated matches	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
H	d2pozh1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
H	d2pozh3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
G	d2pozg2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	automated matches	automated matches	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
G	d2pozg1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
G	d2pozg3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
F	d2pozf2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	automated matches	automated matches	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
F	d2pozf1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
F	d2pozf3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
E	d2poze2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	automated matches	automated matches	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
E	d2poze1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
E	d2poze3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
D	d2pozd2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	automated matches	automated matches	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
D	d2pozd1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
D	d2pozd3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
C	d2pozc2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	automated matches	automated matches	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
C	d2pozc1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
C	d2pozc3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
B	d2pozb2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	automated matches	automated matches	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
B	d2pozb1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
B	d2pozb3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
A	d2poza2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	automated matches	automated matches	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
A	d2poza1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)
A	d2poza3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mesorhizobium japonicum MAFF 303099 ) [TaxId: 266835 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	Biopterin_H	e2pozH2	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (v294.1)
H	tRNA_anti-codon	e2pozH3	A: a/b three-layered sandwiches	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: tRNA_anti-codon	ECOD (v294.1)
G	Biopterin_H	e2pozG2	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (v294.1)
G	tRNA_anti-codon	e2pozG3	A: a/b three-layered sandwiches	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: tRNA_anti-codon	ECOD (v294.1)
F	Biopterin_H	e2pozF2	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (v294.1)
F	tRNA_anti-codon	e2pozF3	A: a/b three-layered sandwiches	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: tRNA_anti-codon	ECOD (v294.1)
E	Biopterin_H	e2pozE2	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (v294.1)
E	tRNA_anti-codon	e2pozE3	A: a/b three-layered sandwiches	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: tRNA_anti-codon	ECOD (v294.1)
D	Biopterin_H	e2pozD2	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (v294.1)
D	tRNA_anti-codon	e2pozD3	A: a/b three-layered sandwiches	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: tRNA_anti-codon	ECOD (v294.1)
C	Biopterin_H	e2pozC2	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (v294.1)
C	tRNA_anti-codon	e2pozC3	A: a/b three-layered sandwiches	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: tRNA_anti-codon	ECOD (v294.1)
B	Biopterin_H	e2pozB2	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (v294.1)
B	tRNA_anti-codon	e2pozB3	A: a/b three-layered sandwiches	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: tRNA_anti-codon	ECOD (v294.1)
A	SoxZ	e2pozA1	A: a/b three-layered sandwiches	X: Profilin-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SoxZ	ECOD (v294.1)
A	tRNA_anti-codon	e2pozA3	A: a/b three-layered sandwiches	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: tRNA_anti-codon	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
H	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
G	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
G	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
F	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
F	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
E	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
E	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
D	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
D	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
C	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
C	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
B	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
B	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
A	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
A	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Putative dehydratase	lyase activity catalytic activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR034593	D-galactonate dehydratase DgoD-like	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR029065	Enolase_C-like	Unknown
A, B, C, D, E A, B, C, D, E, F, G, H	IPR013342	Mandelate racemase, C-terminal domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR029017	Enolase-like, N-terminal	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036849	Enolase-like, C-terminal domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR013341	Mandelate racemase, N-terminal domain	Domain