Crystal structure of a M20 family metallo peptidase from Streptococcus pneumoniae
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | UvrB_inter | e2pokB1 | A: beta barrels | X: Anticodon-binding domain of Class II aaRS | H: Anticodon-binding domain of Class II aaRS | T: Anticodon-binding domain of Class II aaRS | F: UvrB_inter | ECOD (v294.2) |
| A | AhpC-TSA | e2pokA2 | A: beta barrels | X: Chlorophyll a-b binding protein | H: Chlorophyll a-b binding protein | T: Chlorophyll a-b binding protein | F: AhpC-TSA | ECOD (v294.2) |
| A | PGI | e2pokA1 | A: beta barrels | X: omega toxin-like | H: omega toxin-related | T: omega toxin-related | F: PGI | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.630.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aminopeptidase | Zn peptidases | CATH (4.3.0) |
| B | 3.30.70.360 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
| A | 3.40.630.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aminopeptidase | Zn peptidases | CATH (4.3.0) |
| A | 3.30.70.360 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01546 | Peptidase family M20/M25/M40 (Peptidase_M20) | Peptidase family M20/M25/M40 | - | Family | |
| PF07687 | Peptidase dimerisation domain (M20_dimer) | Peptidase dimerisation domain | This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the M20 family of peptidases [1]. This family includes a range of zinc metallopeptidases belonging to several families in the peptidase ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Peptidase, M20/M25/M40 family |
|
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR002933 | Peptidase M20 | Family | |
| IPR051458 | Cytosolic and Metallo Dipeptidase | Family | |
| IPR011650 | Peptidase M20, dimerisation domain | Domain |














