2PLS | pdb_00002pls

Structural Genomics, the crystal structure of the CorC/HlyC transporter associated domain of a CBS domain protein from Chlorobium tepidum TLS

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ld2plsl2 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like CorC/HlyC domain-like Hypothetical protein CT0541 (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Ld2plsl3 Artifacts Tags Tags Tags N-terminal Tags (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Kd2plsk2 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like CorC/HlyC domain-like Hypothetical protein CT0541 (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Kd2plsk3 Artifacts Tags Tags Tags N-terminal Tags (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Jd2plsj2 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like CorC/HlyC domain-like Hypothetical protein CT0541 (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Jd2plsj3 Artifacts Tags Tags Tags N-terminal Tags (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Id2plsi2 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like CorC/HlyC domain-like Hypothetical protein CT0541 (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Id2plsi3 Artifacts Tags Tags Tags N-terminal Tags (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Hd2plsh2 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like CorC/HlyC domain-like Hypothetical protein CT0541 (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Hd2plsh3 Artifacts Tags Tags Tags N-terminal Tags (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Gd2plsg2 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like CorC/HlyC domain-like Hypothetical protein CT0541 (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Gd2plsg3 Artifacts Tags Tags Tags N-terminal Tags (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Fd2plsf2 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like CorC/HlyC domain-like Hypothetical protein CT0541 (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Fd2plsf3 Artifacts Tags Tags Tags N-terminal Tags (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Ed2plse2 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like CorC/HlyC domain-like Hypothetical protein CT0541 (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Ed2plse3 Artifacts Tags Tags Tags N-terminal Tags (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Dd2plsd2 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like CorC/HlyC domain-like Hypothetical protein CT0541 (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Dd2plsd3 Artifacts Tags Tags Tags N-terminal Tags (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Cd2plsc2 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like CorC/HlyC domain-like Hypothetical protein CT0541 (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Cd2plsc3 Artifacts Tags Tags Tags N-terminal Tags (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Bd2plsb2 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like CorC/HlyC domain-like Hypothetical protein CT0541 (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Bd2plsb3 Artifacts Tags Tags Tags N-terminal Tags (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Ad2plsa1 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like CorC/HlyC domain-like Hypothetical protein CT0541 (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)
Ad2plsa2 Artifacts Tags Tags Tags N-terminal Tags (Chlorobaculum tepidum TLS ) [TaxId: 194439 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
LSCOP2B SuperfamilyFAD-binding/transporter-associated domain-like 8054377 3000913 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyFAD-binding/transporter-associated domain-like 8054377 3000913 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyFAD-binding/transporter-associated domain-like 8054377 3000913 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyFAD-binding/transporter-associated domain-like 8054377 3000913 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyFAD-binding/transporter-associated domain-like 8054377 3000913 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyFAD-binding/transporter-associated domain-like 8054377 3000913 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyFAD-binding/transporter-associated domain-like 8054377 3000913 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyFAD-binding/transporter-associated domain-like 8054377 3000913 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyFAD-binding/transporter-associated domain-like 8054377 3000913 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyFAD-binding/transporter-associated domain-like 8054377 3000913 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyFAD-binding/transporter-associated domain-like 8054377 3000913 SCOP2B (2022-06-29)
ASCOP2 FamilyCorC/HlyC domain-like 8017478 4002490 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyFAD-binding/transporter-associated domain-like 8054377 3000913 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
LCorC_HlyCe2plsL1 A: a+b complex topologyX: FAD-binding domain-likeH: CorC/HlyC domain-like (From Topology)T: CorC/HlyC domain-likeF: CorC_HlyCECOD (1.6)
KCorC_HlyCe2plsK1 A: a+b complex topologyX: FAD-binding domain-likeH: CorC/HlyC domain-like (From Topology)T: CorC/HlyC domain-likeF: CorC_HlyCECOD (1.6)
JCorC_HlyCe2plsJ1 A: a+b complex topologyX: FAD-binding domain-likeH: CorC/HlyC domain-like (From Topology)T: CorC/HlyC domain-likeF: CorC_HlyCECOD (1.6)
ICorC_HlyCe2plsI1 A: a+b complex topologyX: FAD-binding domain-likeH: CorC/HlyC domain-like (From Topology)T: CorC/HlyC domain-likeF: CorC_HlyCECOD (1.6)
HCorC_HlyCe2plsH1 A: a+b complex topologyX: FAD-binding domain-likeH: CorC/HlyC domain-like (From Topology)T: CorC/HlyC domain-likeF: CorC_HlyCECOD (1.6)
GCorC_HlyCe2plsG1 A: a+b complex topologyX: FAD-binding domain-likeH: CorC/HlyC domain-like (From Topology)T: CorC/HlyC domain-likeF: CorC_HlyCECOD (1.6)
FCorC_HlyCe2plsF1 A: a+b complex topologyX: FAD-binding domain-likeH: CorC/HlyC domain-like (From Topology)T: CorC/HlyC domain-likeF: CorC_HlyCECOD (1.6)
ECorC_HlyCe2plsE1 A: a+b complex topologyX: FAD-binding domain-likeH: CorC/HlyC domain-like (From Topology)T: CorC/HlyC domain-likeF: CorC_HlyCECOD (1.6)
DCorC_HlyCe2plsD1 A: a+b complex topologyX: FAD-binding domain-likeH: CorC/HlyC domain-like (From Topology)T: CorC/HlyC domain-likeF: CorC_HlyCECOD (1.6)
CCorC_HlyCe2plsC1 A: a+b complex topologyX: FAD-binding domain-likeH: CorC/HlyC domain-like (From Topology)T: CorC/HlyC domain-likeF: CorC_HlyCECOD (1.6)
BCorC_HlyCe2plsB1 A: a+b complex topologyX: FAD-binding domain-likeH: CorC/HlyC domain-like (From Topology)T: CorC/HlyC domain-likeF: CorC_HlyCECOD (1.6)
ACorC_HlyCe2plsA1 A: a+b complex topologyX: FAD-binding domain-likeH: CorC/HlyC domain-like (From Topology)T: CorC/HlyC domain-likeF: CorC_HlyCECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
L3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 3CATH (4.3.0)
K3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 3CATH (4.3.0)
J3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 3CATH (4.3.0)
I3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 3CATH (4.3.0)
H3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 3CATH (4.3.0)
G3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 3CATH (4.3.0)
F3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 3CATH (4.3.0)
E3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 3CATH (4.3.0)
D3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 3CATH (4.3.0)
C3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 3CATH (4.3.0)
B3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 3CATH (4.3.0)
A3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 3CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF03471Transporter associated domain (CorC_HlyC)Transporter associated domainThis small domain is found in a family of proteins with the Pfam:PF01595 domain and two CBS domains with this domain found at the C-terminus of the proteins, the domain is also found at the C terminus of some Na+/H+ antiporters. This domain is also f ...This small domain is found in a family of proteins with the Pfam:PF01595 domain and two CBS domains with this domain found at the C-terminus of the proteins, the domain is also found at the C terminus of some Na+/H+ antiporters. This domain is also found in CorC that is involved in Magnesium and cobalt efflux. The function of this domain is uncertain but might be involved in modulating transport of ion substrates.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
CBS domain protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR046342CBS domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR044751Ion transporter-like, CBS domainDomain
A, B, C, D, E
IPR000644CBS domainDomain
A, B, C, D, E
IPR002550CNNM, transmembrane domainDomain
A, B, C, D, E
IPR036318FAD-binding, type PCMH-like superfamilyHomologous Superfamily
A, B, C, D, E
IPR005170Transporter-associated domainDomain
A, B, C, D, E
IPR051676UPF0053 domain-containing proteinFamily
A, B, C, D, E
IPR016169FAD-binding, type PCMH, subdomain 2Homologous Superfamily