2PJD
Crystal structure of 16S rRNA methyltransferase RsmC
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | MTS_N | e2pjdA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: MTS_N | ECOD (1.6) |
A | Methyltransf_11_2 | e2pjdA2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Methyltransf_11_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.150 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Vaccinia Virus protein VP39 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05175 | Methyltransferase small domain (MTS) | Methyltransferase small domain | This domain is found in ribosomal RNA small subunit methyltransferase C (eg Swiss:P44453) as well as other methyltransferases (eg Swiss:Q53742). | Domain | |
PF08468 | Methyltransferase small domain N-terminal (MTS_N) | Methyltransferase small domain N-terminal | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR046977 | rRNA (guanine-N(2)-)-methyltransferase RsmC/RlmG | Family | |
IPR002052 | DNA methylase, N-6 adenine-specific, conserved site | Conserved Site | |
IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Homologous Superfamily | |
IPR007848 | Methyltransferase small domain | Domain | |
IPR013675 | Methyltransferase small, N-terminal | Domain | |
IPR023543 | rRNA small subunit methyltransferase C | Family |