2PIF
Crystal structure of UPF0317 protein PSPTO_5379 from Pseudomonas syringae pv. tomato. NorthEast Structural Genomics target PsR181
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2pifa1 | Alpha and beta proteins (a+b) | PSTPO5379-like | PSTPO5379-like | PSTPO5379-like | Uncharacterized protein PSTPO5379 | (Pseudomonas syringae pv. tomato str. DC3000 ) [TaxId: 223283 ], | SCOPe (2.08) |
B | d2pifb_ | Alpha and beta proteins (a+b) | PSTPO5379-like | PSTPO5379-like | PSTPO5379-like | Uncharacterized protein PSTPO5379 | (Pseudomonas syringae pv. tomato str. DC3000 ) [TaxId: 223283 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DUF1445 | e2pifA2 | A: a+b two layers | X: Alpha-beta plaits | H: Nitrogen repressor-like proteins (From Topology) | T: Nitrogen repressor-like proteins | F: DUF1445 | ECOD (1.6) |
B | DUF1445 | e2pifB2 | A: a+b two layers | X: Alpha-beta plaits | H: Nitrogen repressor-like proteins (From Topology) | T: Nitrogen repressor-like proteins | F: DUF1445 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.1640.10 | Alpha Beta | 3-Layer(aba) Sandwich | PSTPO5379-like | PSTPO5379-like | CATH (4.3.0) |
A | 3.30.2040.10 | Alpha Beta | 2-Layer Sandwich | PSTPO5379-like fold | PSTPO5379-like domain | CATH (4.3.0) |
B | 3.40.1640.10 | Alpha Beta | 3-Layer(aba) Sandwich | PSTPO5379-like | PSTPO5379-like | CATH (4.3.0) |
B | 3.30.2040.10 | Alpha Beta | 2-Layer Sandwich | PSTPO5379-like fold | PSTPO5379-like domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07286 | D-glutamate cyclase (D-Glu_cyclase) | D-glutamate cyclase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016938 | Uncharacterised protein family UPF0317 | Family | |
IPR038021 | Putative hydro-lyase | Homologous Superfamily | |
IPR009906 | D-glutamate cyclase | Family |