2PGC | pdb_00002pgc

Crystal structure of a a marine metagenome protein (jcvi_pep_1096685590403) from uncultured marine organism at 2.53 A resolution

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ed2pgce_ Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel Marine metagenome family DABB3 Uncharacterized protein GOS_2596953 (uncultured marine organism ) [TaxId: 360281 ], SCOPe (2.08)
Dd2pgcd_ Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel Marine metagenome family DABB3 Uncharacterized protein GOS_2596953 (uncultured marine organism ) [TaxId: 360281 ], SCOPe (2.08)
Cd2pgcc_ Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel Marine metagenome family DABB3 Uncharacterized protein GOS_2596953 (uncultured marine organism ) [TaxId: 360281 ], SCOPe (2.08)
Bd2pgcb_ Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel Marine metagenome family DABB3 Uncharacterized protein GOS_2596953 (uncultured marine organism ) [TaxId: 360281 ], SCOPe (2.08)
Ad2pgca1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel Marine metagenome family DABB3 Uncharacterized protein GOS_2596953 (uncultured marine organism ) [TaxId: 360281 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyMarine metagenome family DABB3 8023239 4001920 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyDimeric alpha+beta barrel 8009559 3000089 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyDimeric alpha+beta barrel 8035619 3000089 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
EBiopterin_He2pgcE1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: Biopterin_HECOD (v294.1)
DBiopterin_He2pgcD1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: Biopterin_HECOD (v294.1)
CBiopterin_He2pgcC1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: Biopterin_HECOD (v294.1)
BBiopterin_He2pgcB1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: Biopterin_HECOD (v294.1)
ADUF6854e2pgcA2 A: a/b three-layered sandwichesX: Hormone receptor domain (HRM, Pfam 02793)H: Dimeric alpha+beta barrelT: Dimeric alpha+beta barrelF: DUF6854ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
E3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
D3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
C3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
B3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
A3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)