Skip to main content

 2PDR | pdb_00002pdr

1.7 Angstrom Crystal Structure of the Photo-excited Blue-light Photoreceptor Vivid

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ADAO, NAD_binding_8e2pdrA1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: DAO, NAD_binding_8ECOD (v295.2)
BDAO, NAD_binding_8e2pdrB1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: DAO, NAD_binding_8ECOD (v295.2)
CDAO, NAD_binding_8e2pdrC1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: DAO, NAD_binding_8ECOD (v295.2)
DDAO, NAD_binding_8e2pdrD1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: DAO, NAD_binding_8ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.450.20 Alpha Beta 2-Layer Sandwich Beta-Lactamase PAS domainCATH (4.3.0)
B3.30.450.20 Alpha Beta 2-Layer Sandwich Beta-Lactamase PAS domainCATH (4.3.0)
C3.30.450.20 Alpha Beta 2-Layer Sandwich Beta-Lactamase PAS domainCATH (4.3.0)
D3.30.450.20 Alpha Beta 2-Layer Sandwich Beta-Lactamase PAS domainCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Vivid PAS protein VVD- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR035965PAS domain superfamilyHomologous Superfamily
A, B, C, D
IPR000014PAS domainDomain