Crystal structure of YhfZ from Shigella flexneri
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d2ozza1 | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | Phosphate binding protein-like | Hypothetical protein YhfZ | (Shigella flexneri 2a ) [TaxId: 42897 ], | SCOPe (2.08) |
| A | d2ozza2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Shigella flexneri 2a ) [TaxId: 42897 ], | SCOPe (2.08) |
| B | d2ozzb_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | Phosphate binding protein-like | Hypothetical protein YhfZ | (Shigella flexneri 2a ) [TaxId: 42897 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | Phosphate binding protein-like | 8022908 | 4000229 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Type 2 solute binding protein-like | 8035288 | 3000083 | SCOP2 (2022-06-29) |
| B | SCOP2B Superfamily | Type 2 solute binding protein-like | 8035288 | 3000083 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | YhfZ_C | e2ozzA2 | A: a/b three-layered sandwiches | X: Alpha-beta plaits | H: Protease propeptides/inhibitors | T: Protease propeptides/inhibitors | F: YhfZ_C | ECOD (v294.1) |
| B | LysR_substrate | e2ozzB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: LysR_substrate | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| B | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF14503 | YhfZ C-terminal domain (YhfZ_C) | YhfZ C-terminal domain | - | Family |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR032791 | Uncharacterised protein YhfZ, C-terminal domain | Domain |
