2OXG | pdb_00002oxg

The SoxYZ Complex of Paracoccus pantotrophus

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
G [auth E]	d2oxge_	All beta proteins	Immunoglobulin-like beta-sandwich	E set domains	automated matches	automated matches	(Paracoccus denitrificans ) [TaxId: 266 ],	SCOPe (2.08)
E [auth C]	d2oxgc_	All beta proteins	Immunoglobulin-like beta-sandwich	E set domains	automated matches	automated matches	(Paracoccus denitrificans ) [TaxId: 266 ],	SCOPe (2.08)
C [auth A]	d2oxga_	All beta proteins	Immunoglobulin-like beta-sandwich	E set domains	automated matches	automated matches	(Paracoccus denitrificans ) [TaxId: 266 ],	SCOPe (2.08)
A [auth Z]	d2oxgz_	All beta proteins	Immunoglobulin-like beta-sandwich	E set domains	automated matches	automated matches	(Paracoccus denitrificans ) [TaxId: 266 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H [auth F]	SCOP2B Superfamily	E set domains	8091811	3000070	SCOP2B (2022-06-29)
F [auth D]	SCOP2B Superfamily	E set domains	8091811	3000070	SCOP2B (2022-06-29)
D [auth B]	SCOP2 Family	SoxY-like	8048826	4006232	SCOP2 (2022-06-29)
D [auth B]	SCOP2 Superfamily	E set domains	8091811	3000070	SCOP2 (2022-06-29)
B [auth Y]	SCOP2B Superfamily	E set domains	8091811	3000070	SCOP2B (2022-06-29)
G [auth E]	SCOP2 Family	SoxZ-like	8086229	4007568	SCOP2 (2022-06-29)
G [auth E]	SCOP2 Superfamily	E set domains	8086230	3000070	SCOP2 (2022-06-29)
E [auth C]	SCOP2B Superfamily	E set domains	8086230	3000070	SCOP2B (2022-06-29)
C [auth A]	SCOP2B Superfamily	E set domains	8086230	3000070	SCOP2B (2022-06-29)
A [auth Z]	SCOP2B Superfamily	E set domains	8086230	3000070	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H [auth F]	Biopterin_H	e2oxgF1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (v294.1)
F [auth D]	Biopterin_H	e2oxgD1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (v294.1)
D [auth B]	Biopterin_H	e2oxgB1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (v294.1)
B [auth Y]	TetR_C_21	e2oxgY1	A: a/b three-layered sandwiches	X: Carbon-nitrogen hydrolase-like	H: Metallo-dependent phosphatases	T: Metallo-dependent phosphatases	F: TetR_C_21	ECOD (v294.1)
G [auth E]	Biopterin_H	e2oxgE1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (v294.1)
E [auth C]	Biopterin_H	e2oxgC1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (v294.1)
C [auth A]	Biopterin_H	e2oxgA1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (v294.1)
A [auth Z]	Biopterin_H	e2oxgZ1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H [auth F]	2.60.40.2470	Mainly Beta	Sandwich	Immunoglobulin-like	SoxY domain	CATH (4.3.0)
F [auth D]	2.60.40.2470	Mainly Beta	Sandwich	Immunoglobulin-like	SoxY domain	CATH (4.3.0)
D [auth B]	2.60.40.2470	Mainly Beta	Sandwich	Immunoglobulin-like	SoxY domain	CATH (4.3.0)
B [auth Y]	2.60.40.2470	Mainly Beta	Sandwich	Immunoglobulin-like	SoxY domain	CATH (4.3.0)
G [auth E]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
E [auth C]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
C [auth A]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
A [auth Z]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth Y], D [auth B], F [auth D], H [auth F]	IPR016568	Sulphur oxidation, SoxY	Family
B [auth Y], D [auth B], F [auth D], H [auth F]	IPR038162	Ig-like SoxY domain superfamily	Homologous Superfamily
B [auth Y], D [auth B], F [auth D], H [auth F]	IPR032711	Ig-like SoxY domain	Domain
A [auth Z], C [auth A], E [auth C], G [auth E]	IPR030995	Thiosulfate oxidation carrier complex protein SoxZ	Family
A [auth Z], C [auth A], E [auth C], G [auth E]	IPR014880	Sulphur oxidation protein SoxZ	Domain
A [auth Z], C [auth A], E [auth C], G [auth E]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A [auth Z], C [auth A], E [auth C], G [auth E]	IPR014756	Immunoglobulin E-set	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.