2OX7 | pdb_00002ox7

Crystal structure of protein EF1440 from Enterococcus faecalis

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d2ox7d2	All beta proteins	YopX-like	YopX-like	YopX-like	Hypothetical protein EF1440	(Enterococcus faecalis V583 ) [TaxId: 226185 ],	SCOPe (2.08)
D	d2ox7d3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Enterococcus faecalis V583 ) [TaxId: 226185 ],	SCOPe (2.08)
C	d2ox7c2	All beta proteins	YopX-like	YopX-like	YopX-like	Hypothetical protein EF1440	(Enterococcus faecalis V583 ) [TaxId: 226185 ],	SCOPe (2.08)
C	d2ox7c3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Enterococcus faecalis V583 ) [TaxId: 226185 ],	SCOPe (2.08)
B	d2ox7b2	All beta proteins	YopX-like	YopX-like	YopX-like	Hypothetical protein EF1440	(Enterococcus faecalis V583 ) [TaxId: 226185 ],	SCOPe (2.08)
B	d2ox7b3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Enterococcus faecalis V583 ) [TaxId: 226185 ],	SCOPe (2.08)
A	d2ox7a1	All beta proteins	YopX-like	YopX-like	YopX-like	Hypothetical protein EF1440	(Enterococcus faecalis V583 ) [TaxId: 226185 ],	SCOPe (2.08)
A	d2ox7a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Enterococcus faecalis V583 ) [TaxId: 226185 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	YopX-like	8035227	3000201	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	YopX-like	8035227	3000201	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	YopX-like	8035227	3000201	SCOP2B (2022-06-29)
A	SCOP2 Family	YopX-like	8022847	4001651	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YopX-like	8035227	3000201	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D		e2ox7D1	A: Cloacin translocation domain	X: Cloacin translocation domain	H: Cloacin translocation domain	T: dUTPase	F:	ECOD (20:10:01)
D		e2ox7D2	A: Cloacin translocation domain	X: Cloacin translocation domain	H: Cloacin translocation domain	T: Cloacin	F:	ECOD (20:10:01)
C		e2ox7C1	A: Cloacin translocation domain	X: Cloacin translocation domain	H: Cloacin translocation domain	T: dUTPase	F:	ECOD (20:10:01)
C		e2ox7C2	A: Cloacin translocation domain	X: Cloacin translocation domain	H: Cloacin translocation domain	T: Cloacin	F:	ECOD (20:10:01)
B		e2ox7B1	A: Cloacin translocation domain	X: Cloacin translocation domain	H: Cloacin translocation domain	T: dUTPase	F:	ECOD (20:10:01)
B		e2ox7B2	A: Cloacin translocation domain	X: Cloacin translocation domain	H: Cloacin translocation domain	T: Cloacin	F:	ECOD (20:10:01)
A		e2ox7A1	A: YopX, C-terminal domain-like	X: YopX, C-terminal domain-like	H: YopX, C-terminal domain-like	T: YopX	F:	ECOD (20:10:01)
A		e2ox7A2	A: YopX, N-terminal domain-like	X: YopX, N-terminal domain-like	H: YopX, N-terminal domain-like	T: YopX	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	2.30.30.310	Mainly Beta	Roll	SH3 type barrels.	YopX-like domains	CATH (4.3.0)
D	2.30.30.290	Mainly Beta	Roll	SH3 type barrels.	YopX-like domains	CATH (4.3.0)
C	2.30.30.310	Mainly Beta	Roll	SH3 type barrels.	YopX-like domains	CATH (4.3.0)
C	2.30.30.290	Mainly Beta	Roll	SH3 type barrels.	YopX-like domains	CATH (4.3.0)
B	2.30.30.310	Mainly Beta	Roll	SH3 type barrels.	YopX-like domains	CATH (4.3.0)
B	2.30.30.290	Mainly Beta	Roll	SH3 type barrels.	YopX-like domains	CATH (4.3.0)
A	2.30.30.310	Mainly Beta	Roll	SH3 type barrels.	YopX-like domains	CATH (4.3.0)
A	2.30.30.290	Mainly Beta	Roll	SH3 type barrels.	YopX-like domains	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF09643	YopX protein (YopX)	YopX protein	YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR019096	YopX protein	Domain
A, B, C, D	IPR023385	YopX-like, C-terminal	Homologous Superfamily
A, B, C, D	IPR010024	Conserved hypothetical protein CHP1671	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.