2OX7 | pdb_00002ox7

Crystal structure of protein EF1440 from Enterococcus faecalis

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d2ox7d2	All beta proteins	YopX-like	YopX-like	YopX-like	Hypothetical protein EF1440	(Enterococcus faecalis V583 ) [TaxId: 226185 ],	SCOPe (2.08)
D	d2ox7d3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Enterococcus faecalis V583 ) [TaxId: 226185 ],	SCOPe (2.08)
C	d2ox7c2	All beta proteins	YopX-like	YopX-like	YopX-like	Hypothetical protein EF1440	(Enterococcus faecalis V583 ) [TaxId: 226185 ],	SCOPe (2.08)
C	d2ox7c3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Enterococcus faecalis V583 ) [TaxId: 226185 ],	SCOPe (2.08)
B	d2ox7b2	All beta proteins	YopX-like	YopX-like	YopX-like	Hypothetical protein EF1440	(Enterococcus faecalis V583 ) [TaxId: 226185 ],	SCOPe (2.08)
B	d2ox7b3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Enterococcus faecalis V583 ) [TaxId: 226185 ],	SCOPe (2.08)
A	d2ox7a1	All beta proteins	YopX-like	YopX-like	YopX-like	Hypothetical protein EF1440	(Enterococcus faecalis V583 ) [TaxId: 226185 ],	SCOPe (2.08)
A	d2ox7a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Enterococcus faecalis V583 ) [TaxId: 226185 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	YopX-like	8035227	3000201	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	YopX-like	8035227	3000201	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	YopX-like	8035227	3000201	SCOP2B (2022-06-29)
A	SCOP2 Family	YopX-like	8022847	4001651	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YopX-like	8035227	3000201	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	YopX_C	e2ox7D1	A: beta barrels	X: YopX, C-terminal domain-like (From Topology)	H: YopX, C-terminal domain-like (From Topology)	T: YopX, C-terminal domain-like	F: YopX_C	ECOD (1.6)
D	YopX_N	e2ox7D2	A: beta duplicates or obligate multimers	X: YopX, N-terminal domain-like (From Topology)	H: YopX, N-terminal domain-like (From Topology)	T: YopX, N-terminal domain-like	F: YopX_N	ECOD (1.6)
C	YopX_C	e2ox7C1	A: beta barrels	X: YopX, C-terminal domain-like (From Topology)	H: YopX, C-terminal domain-like (From Topology)	T: YopX, C-terminal domain-like	F: YopX_C	ECOD (1.6)
C	YopX_N	e2ox7C2	A: beta duplicates or obligate multimers	X: YopX, N-terminal domain-like (From Topology)	H: YopX, N-terminal domain-like (From Topology)	T: YopX, N-terminal domain-like	F: YopX_N	ECOD (1.6)
B	YopX_C	e2ox7B1	A: beta barrels	X: YopX, C-terminal domain-like (From Topology)	H: YopX, C-terminal domain-like (From Topology)	T: YopX, C-terminal domain-like	F: YopX_C	ECOD (1.6)
B	YopX_N	e2ox7B2	A: beta duplicates or obligate multimers	X: YopX, N-terminal domain-like (From Topology)	H: YopX, N-terminal domain-like (From Topology)	T: YopX, N-terminal domain-like	F: YopX_N	ECOD (1.6)
A	YopX_C	e2ox7A1	A: beta barrels	X: YopX, C-terminal domain-like (From Topology)	H: YopX, C-terminal domain-like (From Topology)	T: YopX, C-terminal domain-like	F: YopX_C	ECOD (1.6)
A	YopX_N	e2ox7A2	A: beta duplicates or obligate multimers	X: YopX, N-terminal domain-like (From Topology)	H: YopX, N-terminal domain-like (From Topology)	T: YopX, N-terminal domain-like	F: YopX_N	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	2.30.30.310	Mainly Beta	Roll	SH3 type barrels.	YopX-like domains	CATH (4.3.0)
D	2.30.30.290	Mainly Beta	Roll	SH3 type barrels.	YopX-like domains	CATH (4.3.0)
C	2.30.30.310	Mainly Beta	Roll	SH3 type barrels.	YopX-like domains	CATH (4.3.0)
C	2.30.30.290	Mainly Beta	Roll	SH3 type barrels.	YopX-like domains	CATH (4.3.0)
B	2.30.30.310	Mainly Beta	Roll	SH3 type barrels.	YopX-like domains	CATH (4.3.0)
B	2.30.30.290	Mainly Beta	Roll	SH3 type barrels.	YopX-like domains	CATH (4.3.0)
A	2.30.30.310	Mainly Beta	Roll	SH3 type barrels.	YopX-like domains	CATH (4.3.0)
A	2.30.30.290	Mainly Beta	Roll	SH3 type barrels.	YopX-like domains	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF09643	YopX protein (YopX)	YopX protein	YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR019096	YopX protein	Domain
A, B, C, D	IPR023385	YopX-like, C-terminal	Homologous Superfamily
A, B, C, D	IPR010024	Conserved hypothetical protein CHP1671	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.