2OQT | pdb_00002oqt

Structural Genomics, the crystal structure of a putative PTS IIA domain from Streptococcus pyogenes M1 GAS

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d2oqtd1	Alpha and beta proteins (a+b)	Phoshotransferase/anion transport protein	Phoshotransferase/anion transport protein	automated matches	automated matches	(Streptococcus pyogenes serotype M1 ) [TaxId: 301447 ],	SCOPe (2.08)
D	d2oqtd2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Streptococcus pyogenes serotype M1 ) [TaxId: 301447 ],	SCOPe (2.08)
C	d2oqtc1	Alpha and beta proteins (a+b)	Phoshotransferase/anion transport protein	Phoshotransferase/anion transport protein	automated matches	automated matches	(Streptococcus pyogenes serotype M1 ) [TaxId: 301447 ],	SCOPe (2.08)
C	d2oqtc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Streptococcus pyogenes serotype M1 ) [TaxId: 301447 ],	SCOPe (2.08)
B	d2oqtb1	Alpha and beta proteins (a+b)	Phoshotransferase/anion transport protein	Phoshotransferase/anion transport protein	automated matches	automated matches	(Streptococcus pyogenes serotype M1 ) [TaxId: 301447 ],	SCOPe (2.08)
B	d2oqtb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Streptococcus pyogenes serotype M1 ) [TaxId: 301447 ],	SCOPe (2.08)
A	d2oqta1	Alpha and beta proteins (a+b)	Phoshotransferase/anion transport protein	Phoshotransferase/anion transport protein	automated matches	automated matches	(Streptococcus pyogenes serotype M1 ) [TaxId: 301447 ],	SCOPe (2.08)
A	d2oqta2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Streptococcus pyogenes serotype M1 ) [TaxId: 301447 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	HTHP	e2oqtD1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: HTHP	ECOD (v294.1)
C	HTHP	e2oqtC1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: HTHP	ECOD (v294.1)
B	HTHP	e2oqtB1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: HTHP	ECOD (v294.1)
A	Phospholip_A2_1	e2oqtA1	A: a/b three-layered sandwiches	X: Profilin-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Phospholip_A2_1	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.40.930.10	Alpha Beta	3-Layer(aba) Sandwich	Mannitol-specific EII	Chain A	CATH (4.3.0)
C	3.40.930.10	Alpha Beta	3-Layer(aba) Sandwich	Mannitol-specific EII	Chain A	CATH (4.3.0)
B	3.40.930.10	Alpha Beta	3-Layer(aba) Sandwich	Mannitol-specific EII	Chain A	CATH (4.3.0)
A	3.40.930.10	Alpha Beta	3-Layer(aba) Sandwich	Mannitol-specific EII	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 (PTS_EIIA_2)	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Hypothetical protein SPy0176	kinase activity transferase activity catalytic activity transferase activity, transferring phosphorus-containing groups	import into cell phosphoenolpyruvate-dependent sugar phosphotransferase system transport import across plasma membrane carbohydrate import across plasma membrane carbohydrate transport establishment of localization transmembrane transport localization cellular process carbohydrate transmembrane transport	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR002178	PTS EIIA type-2 domain	Domain
A, B, C, D	IPR016152	Phosphotransferase/anion transporter	Homologous Superfamily
A, B, C, D	IPR051351	Ascorbate-specific PTS system EIIA component	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.