2OM3
High-resolution cryo-EM structure of Tobacco Mosaic Virus
Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | d2om3a1 | All alpha proteins | Four-helical up-and-down bundle | TMV-like viral coat proteins | TMV-like viral coat proteins | Tobacco mosaic virus coat protein | (Tobacco mosaic virus ) [TaxId: 12242 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth A] | SCOP2 Family | TMV-like viral coat proteins | 8099947 | 4000823 | SCOP2 (2022-06-29) |
B [auth A] | SCOP2 Superfamily | TMV-like viral coat proteins | 8099948 | 3001587 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | TMV_coat | e2om3A1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: TMV-like viral coat proteins (From Topology) | T: TMV-like viral coat proteins | F: TMV_coat | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth A] | PF00721 | Virus coat protein (TMV like) (TMV_coat) | Virus coat protein (TMV like) | This family contains coat proteins from tobamoviruses, hordeiviruses, Tobraviruses, Furoviruses and Potyviruses. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth R] | Tobacco Mosaic Virus RNA | - | - | - |
B [auth A] | Coat protein | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
B [auth A] | IPR001337 | Tobacco mosaic virus-like, coat protein | Family |
B [auth A] | IPR036417 | Tobacco mosaic virus-like, coat protein superfamily | Homologous Superfamily |