2O6K

Crystal structure of UPF0346 from Staphylococcus aureus. Northeast Structural Genomics target ZR218.

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2o6ka1	All alpha proteins	SAM domain-like	YozE-like	YozE-like	Uncharacterized protein MW1311	(Staphylococcus aureus subsp. aureus MW2 ) [TaxId: 196620 ],	SCOPe (2.08)
A	d2o6ka2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Staphylococcus aureus subsp. aureus MW2 ) [TaxId: 196620 ],	SCOPe (2.08)
B	d2o6kb2	All alpha proteins	SAM domain-like	YozE-like	YozE-like	Uncharacterized protein MW1311	(Staphylococcus aureus subsp. aureus MW2 ) [TaxId: 196620 ],	SCOPe (2.08)
B	d2o6kb3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Staphylococcus aureus subsp. aureus MW2 ) [TaxId: 196620 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	YozE-like	8022640	4001393	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YozE-like	8035020	3001464	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	YozE-like	8035020	3001464	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	YozE_SAM_like	e2o6kA1	A: alpha arrays	X: HhH/H2TH	H: YozE-like (From Topology)	T: YozE-like	F: YozE_SAM_like	ECOD (1.6)
B	YozE_SAM_like	e2o6kB1	A: alpha arrays	X: HhH/H2TH	H: YozE-like (From Topology)	T: YozE-like	F: YozE_SAM_like	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.150.260	Mainly Alpha	Orthogonal Bundle	DNA polymerase	domain 1	CATH (4.3.0)
B	1.10.150.260	Mainly Alpha	Orthogonal Bundle	DNA polymerase	domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF06855	YozE SAM-like fold (YozE_SAM_like)	YozE SAM-like fold	This entry represents a domain found in the YozE-like family. YozE-like is a family of Firmicute proteins that carries a four-helix motif similar to sterile alpha motif (SAM) domains. The family is suggested to fall into two subfamilies, possibly wit ...	This entry represents a domain found in the YozE-like family. YozE-like is a family of Firmicute proteins that carries a four-helix motif similar to sterile alpha motif (SAM) domains. The family is suggested to fall into two subfamilies, possibly with differing functions based on the different surface charges on the three structural representatives, YozE MW0776 and MW1311. What this function is is not yet known although it is likely to involve binding to DNA [1].	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR023089	YozE SAM-like domain	Domain
A, B	IPR036806	YozE SAM-like superfamily	Homologous Superfamily
A, B	IPR010673	Protein of unknown function UPF0346	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.