Crystal Structure of D-Erythronate-4-phosphate Dehydrogenase Complexed with NAD
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | T2SSE | e2o4cA1 | A: alpha bundles | X: Kazal-type serine protease inhibitors-like | H: Kazal-type serine protease inhibitors | T: Kazal-type serine protease inhibitors | F: T2SSE | ECOD (develop294) |
| A | CBS | e2o4cA2 | A: alpha bundles | X: Thioredoxin-like | H: ClpP/crotonase | T: ClpP/crotonase | F: CBS | ECOD (develop294) |
| B | Glucokinase | e2o4cB2 | A: alpha bundles | X: beta-Grasp | H: HTH | T: winged helix domain | F: Glucokinase | ECOD (develop294) |
| B | AmoC | e2o4cB1 | A: alpha bundles | X: jelly-roll | H: Double-stranded beta-helix | T: Double-stranded beta-helix | F: AmoC | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
| A | 3.30.1370.170 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S8 | Chain: A, domain 1 | CATH (4.3.0) |
| B | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
| B | 3.30.1370.170 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S8 | Chain: A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF02826 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain (2-Hacid_dh_C) | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain | This domain is inserted into the catalytic domain, the large dehydrogenase and D-lactate dehydrogenase families in SCOP. N-terminal portion of which is represented by family Pfam:PF00389. | Domain | |
| PF11890 | Domain of unknown function (DUF3410) (DUF3410) | Domain of unknown function (DUF3410) | - | Family | |
| PF00389 | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (2-Hacid_dh) | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain | This family represents the largest portion of the catalytic domain of 2-hydroxyacid dehydrogenases as the NAD binding domain is inserted within the structural domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR038251 | PdxB, dimerisation domain superfamily | Homologous Superfamily | |
| IPR006139 | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain | Domain | |
| IPR020921 | Erythronate-4-phosphate dehydrogenase | Family | |
| IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
| IPR024531 | Erythronate-4-phosphate dehydrogenase, dimerisation domain | Domain | |
| IPR029753 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site | Conserved Site | |
| IPR006140 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain | Domain |














