2O1J | pdb_00002o1j

Structure of the extended diarrhea-inducing domain of rotavirus enterotoxigenic protein NSP4

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d2o1jd_	Coiled coil proteins	Parallel coiled-coil	Rotavirus nonstructural proteins	NSP4 oligomerization domain	automated matches	(Rotavirus str. I321 ) [TaxId: 12578 ],	SCOPe (2.08)
C	d2o1jc_	Coiled coil proteins	Parallel coiled-coil	Rotavirus nonstructural proteins	NSP4 oligomerization domain	automated matches	(Rotavirus str. I321 ) [TaxId: 12578 ],	SCOPe (2.08)
B	d2o1jb_	Coiled coil proteins	Parallel coiled-coil	Rotavirus nonstructural proteins	NSP4 oligomerization domain	automated matches	(Rotavirus str. I321 ) [TaxId: 12578 ],	SCOPe (2.08)
A	d2o1ja_	Coiled coil proteins	Parallel coiled-coil	Rotavirus nonstructural proteins	NSP4 oligomerization domain	automated matches	(Rotavirus str. I321 ) [TaxId: 12578 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Rotavirus nonstructural proteins	8072081	3001522	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Rotavirus nonstructural proteins	8072081	3001522	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Rotavirus nonstructural proteins	8072081	3001522	SCOP2B (2022-06-29)
A	SCOP2 Family	NSP4 oligomerization domain	8072080	4003803	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Rotavirus nonstructural proteins	8072081	3001522	SCOP2 (2022-06-29)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	1.20.5.430	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
C	1.20.5.430	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
B	1.20.5.430	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
A	1.20.5.430	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Nonstructural protein NSP4	passive transmembrane transporter activity channel activity transporter activity transmembrane transporter activity cation binding ion binding binding metal ion binding small molecule binding toxin activity	symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process symbiont-mediated perturbation of host autophagy modulation of process of another organism symbiont-mediated activation of host autophagy biological process involved in interaction with host biological process involved in symbiotic interaction transmembrane transport localization transport monoatomic ion transmembrane transport monoatomic ion transport cellular process symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process symbiont-mediated perturbation of host autophagy modulation of process of another organism symbiont-mediated activation of host autophagy biological process involved in interaction with host biological process involved in symbiotic interaction transmembrane transport localization transport monoatomic ion transmembrane transport monoatomic ion transport cellular process establishment of localization	host cellular component cellular anatomical structure host cell part host cell membrane other organism part membrane extracellular region host intracellular membrane-bounded organelle host intracellular part host cell endoplasmic reticulum host cell cytoplasm part host intracellular organelle host cell cytoplasm host intracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR002107	Rotavirus non-structural protein 4	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.