Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth A]SCOP2B SuperfamilyKorB DNA-binding domain-like8092765 3001083 SCOP2B (2022-06-29)
F [auth B]SCOP2B SuperfamilyKorB DNA-binding domain-like8092765 3001083 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth A]PF13412e2ntzA4 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF13412ECOD (1.6)
E [auth A]PF08775e2ntzA3 A: alpha arraysX: KorB C-terminal domain-likeH: KorB C-terminal domain (From Topology)T: KorB C-terminal domainF: PF08775ECOD (1.6)
E [auth A]PF08775e2ntzA2 A: a+b duplicates or obligate multimersX: ParB dimerization domain (From Homology)H: ParB dimerization domainT: Plasmid-encoded ParB dimerization domainF: PF08775ECOD (1.6)
F [auth B]PF13412e2ntzB4 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF13412ECOD (1.6)
F [auth B]PF08775e2ntzB3 A: alpha arraysX: KorB C-terminal domain-likeH: KorB C-terminal domain (From Topology)T: KorB C-terminal domainF: PF08775ECOD (1.6)
F [auth B]PF08775e2ntzB2 A: a+b duplicates or obligate multimersX: ParB dimerization domain (From Homology)H: ParB dimerization domainT: Plasmid-encoded ParB dimerization domainF: PF08775ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth A],
F [auth B]
PF08775ParB family (ParB)ParB familyParB is a component of the par system which mediates accurate DNA partition during cell division. It recognises A-box and B-box DNA motifs. ParB forms an asymmetric dimer with 2 extended helix-turn-helix (HTH) motifs that bind to A-boxes. The HTH ...ParB is a component of the par system which mediates accurate DNA partition during cell division. It recognises A-box and B-box DNA motifs. ParB forms an asymmetric dimer with 2 extended helix-turn-helix (HTH) motifs that bind to A-boxes. The HTH motifs emanate from a beta sheet coiled coil DNA binding module [1]. Both DNA binding elements are free to rotate around a flexible linker, this enables them to bind to complex arrays of A- and B-box elements on adjacent DNA arms of the looped partition site [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth Y],
C [auth E]
5'-D(*CP*GP*TP*GP*AP*AP*AP*TP*CP*GP*CP*CP*AP*CP*GP*A)-3'---
B [auth W],
D [auth U]
5'-D(*TP*CP*GP*TP*GP*GP*CP*GP*AP*TP*TP*TP*CP*AP*CP*G)-3'---
E [auth A],
F [auth B]
ParB - -