2NML | pdb_00002nml

Crystal structure of HEF2/ERH at 1.55 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2nmla1	Alpha and beta proteins (a+b)	ERH-like	ERH-like	ERH-like	Enhancer of rudimentary homolog, ERH	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	ERH-like	8030763	4000408	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	ERH-like	8043142	3000225	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	ER	e2nmlA1	A: a+b two layers	X: ERH-like (From Topology)	H: ERH-like (From Topology)	T: ERH-like	F: ER	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.2260.10	Alpha Beta	2-Layer Sandwich	ERH-like fold	Enhancer of rudimentary	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01133	Enhancer of rudimentary (ER)	Enhancer of rudimentary	Enhancer of rudimentary is a protein of unknown function that is highly conserved in plants and animals. This protein is found to be an enhancer of the rudimentary gene Swiss:P05990.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Enhancer of rudimentary homolog	sequence-specific DNA binding DNA binding binding nucleoside phosphate binding nucleotide binding nucleic acid binding heterocyclic compound binding methyl-CpG binding small molecule binding RNA binding	nucleobase-containing compound metabolic process primary metabolic process metabolic process cellular process pyrimidine-containing compound metabolic process nucleobase-containing small molecule metabolic process carbohydrate derivative metabolic process small molecule metabolic process pyrimidine nucleoside metabolic process nucleoside metabolic process	midbody cellular anatomical structure protein-containing complex intracellular anatomical structure catalytic complex methylosome methyltransferase complex cytoplasm transferase complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR035912	Enhancer of rudimentary superfamily	Homologous Superfamily
A	IPR000781	Enhancer of rudimentary	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P84090	diabetes mellitus osteosarcoma lymphoplasmacytic lymphoma pancreatic ductal adenocarcinoma MALT lymphoma plasma cell myeloma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.