2N1T
Dynamic binding mode of a synaptotagmin-1-SNARE complex in solution
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | SNARE fusion complex | 8043664 | 3001549 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | SNARE fusion complex | 8043665 | 3001549 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | SNARE fusion complex | 8044158 | 3001549 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | C2 domain (calcium/lipid-binding domain calb) | 8036647 | 3000965 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00957 | e2n1tA1 | A: extended segments | X: Synaptobrevin (From Topology) | H: Synaptobrevin (From Topology) | T: Synaptobrevin | F: PF00957 | ECOD (1.6) |
E | PF00168 | e2n1tE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: C2 domain (From Topology) | T: C2 domain | F: PF00168 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.5.110 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
B | 1.20.5.110 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
C | 1.20.5.110 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
D | 1.20.5.110 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
E | 2.60.40.150 | Mainly Beta | Sandwich | Immunoglobulin-like | C2 domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00957 | Synaptobrevin (Synaptobrevin) | Synaptobrevin | - | Family | |
PF05739 | SNARE domain (SNARE) | SNARE domain | - | Family | |
PF00804 | Syntaxin (Syntaxin) | Syntaxin | Syntaxins are the prototype family of SNARE proteins. They usually consist of three main regions - a C-terminal transmembrane region, a central SNARE domain which is characteristic of and conserved in all syntaxins (Pfam:PF05739), and an N-terminal d ... | Domain | |
PF00835 | SNAP-25 family (SNAP-25) | SNAP-25 family | - | Family | |
PF00168 | C2 domain (C2) | C2 domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016444 | Synaptobrevin/Vesicle-associated membrane protein | Family | |
IPR042855 | v-SNARE, coiled-coil homology domain | Domain | |
IPR001388 | Synaptobrevin-like | Family | |
IPR000727 | Target SNARE coiled-coil homology domain | Domain | |
IPR006012 | Syntaxin/epimorphin, conserved site | Conserved Site | |
IPR010989 | SNARE | Homologous Superfamily | |
IPR006011 | Syntaxin, N-terminal domain | Domain | |
IPR045242 | Syntaxin | Family | |
IPR000727 | Target SNARE coiled-coil homology domain | Domain | |
IPR039077 | SNAP25, N-terminal SNARE motif, chordates | Domain | |
IPR000928 | SNAP-25 domain | Domain | |
IPR000727 | Target SNARE coiled-coil homology domain | Domain | |
IPR039077 | SNAP25, N-terminal SNARE motif, chordates | Domain | |
IPR000928 | SNAP-25 domain | Domain | |
IPR000008 | C2 domain | Domain | |
IPR001565 | Synaptotagmin | Domain | |
IPR035892 | C2 domain superfamily | Homologous Superfamily |