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 2MPU | pdb_00002mpu

Structural and Functional analysis of the Hordeum vulgare L. HvGR-RBP1 protein, a glycine-rich RNA binding protein implicated in the regulation of barley leaf senescence and environmental adaptation

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2mpua_ Alpha and beta proteins (a+b) Ferredoxin-like RNA-binding domain, RBD, aka RNA recognition motif (RRM) automated matches automated matches barley (Hordeum vulgare ) [TaxId: 4513 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyCanonical RBD 8061954 4000236 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyRNA-binding domain, RBD 8061955 3000110 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AC2e2mpuA1 A: alpha arraysX: CCHC-type 1 zinc fingerH: Retrovirus zinc finger-related domainsT: Retrovirus zinc finger-related domainsF: C2ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.70.330 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RRM (RNA recognition motif) domainCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
RBP1 - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
IPR051106RNA-binding and splicing regulatory proteinFamily
IPR000504RNA recognition motif domainDomain
IPR035979RNA-binding domain superfamilyHomologous Superfamily
IPR048289NsCP33-like, RNA recognition motif 2Domain