2MDX | pdb_00002mdx

Solution structure of the human wild type FAPP1-PH domain

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Membrane Protein Annotation: OPM

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2mdxa1	All beta proteins	PH domain-like barrel	PH domain-like	automated matches	automated matches	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d2mdxa2	Artifacts	Tags	Tags	Tags	N-terminal Tags	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	SNF	e2mdxA1	A: a/b three-layered sandwiches	X: Mitochondrial mTERF-like	H: Transcription activator-like effector (TALE)	T: Transcription activator-like effector (TALE)	F: SNF	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.30.29.30	Mainly Beta	Roll	PH-domain like	Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00169	PH domain (PH)	PH domain	PH stands for pleckstrin homology.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Pleckstrin homology domain-containing family A member 3	binding ion binding anion binding phospholipid binding lipid binding phosphatidylinositol phosphate binding phosphatidylinositol-4-phosphate binding small molecule binding identical protein binding protein binding	receptor metabolic process metabolic process cellular process macromolecule metabolic process receptor recycling cellular localization transport intracellular transport establishment of localization vesicle-mediated transport endosomal transport localization intercellular transport cytosolic transport receptor metabolic process metabolic process cellular process macromolecule metabolic process receptor recycling cellular localization transport intracellular transport establishment of localization vesicle-mediated transport endosomal transport localization intercellular transport cytosolic transport retrograde transport, endosome to Golgi establishment of localization in cell vesicle organization cellular component organization organelle organization endosome organization cellular component organization or biogenesis endomembrane system organization	membrane-bounded organelle intracellular anatomical structure early endosome endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle cytoplasm vesicle Golgi apparatus subcompartment membrane-bounded organelle intracellular anatomical structure early endosome endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle cytoplasm vesicle Golgi apparatus subcompartment Golgi apparatus organelle subcompartment trans-Golgi network Golgi membrane membrane bounding membrane of organelle organelle membrane recycling endosome cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR045188	PH domain containing protein Boi1/Boi2-like	Family
A	IPR001849	Pleckstrin homology domain	Domain
A	IPR011993	PH-like domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q9HB20	astrocytic tumor large cell medulloblastoma atrial fibrillation oligodendroglioma atypical teratoid rhabdoid tumor pancreatic ductal adenocarcinoma

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A	OPM	Monotopic/peripheral	All beta monotopic/peripheral	PH domain-like	Pleckstrin-homology domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.