2LYN

HIGH RESOLUTION STRUCTURE OF RED ABALONE LYSIN DIMER

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2lyna_	All alpha proteins	Fertilization protein	Fertilization protein	Fertilization protein	Lysin	(Haliotis rufescens ) [TaxId: 6454 ],	SCOPe (2.08)
B	d2lynb_	All alpha proteins	Fertilization protein	Fertilization protein	Fertilization protein	Lysin	(Haliotis rufescens ) [TaxId: 6454 ],	SCOPe (2.08)
C	d2lync_	All alpha proteins	Fertilization protein	Fertilization protein	Fertilization protein	Lysin	(Haliotis rufescens ) [TaxId: 6454 ],	SCOPe (2.08)
D	d2lynd_	All alpha proteins	Fertilization protein	Fertilization protein	Fertilization protein	Lysin	(Haliotis rufescens ) [TaxId: 6454 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Fertilization protein	8036754	3001337	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Fertilization protein	8036754	3001337	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Fertilization protein	8036754	3001337	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Fertilization protein	8036754	3001337	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF01303	e2lynA1	A: alpha arrays	X: Fertilization protein (From Topology)	H: Fertilization protein (From Topology)	T: Fertilization protein	F: PF01303	ECOD (1.6)
B	PF01303	e2lynB1	A: alpha arrays	X: Fertilization protein (From Topology)	H: Fertilization protein (From Topology)	T: Fertilization protein	F: PF01303	ECOD (1.6)
C	PF01303	e2lynC1	A: alpha arrays	X: Fertilization protein (From Topology)	H: Fertilization protein (From Topology)	T: Fertilization protein	F: PF01303	ECOD (1.6)
D	PF01303	e2lynD1	A: alpha arrays	X: Fertilization protein (From Topology)	H: Fertilization protein (From Topology)	T: Fertilization protein	F: PF01303	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.150.10	Mainly Alpha	Up-down Bundle	Lysin	Fertilization protein	CATH (4.3.0)
B	1.20.150.10	Mainly Alpha	Up-down Bundle	Lysin	Fertilization protein	CATH (4.3.0)
C	1.20.150.10	Mainly Alpha	Up-down Bundle	Lysin	Fertilization protein	CATH (4.3.0)
D	1.20.150.10	Mainly Alpha	Up-down Bundle	Lysin	Fertilization protein	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF01303	Egg lysin (Sperm-lysin) (Egg_lysin)	Egg lysin (Sperm-lysin)	Egg lysin creates a hole in the envelope of the egg thereby allowing the sperm to pass through the envelope and fuse with the egg.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	SPERM LYSIN	-	sexual reproduction reproductive process fertilization single fertilization	membrane-bounded organelle intracellular anatomical structure intracellular vesicle membrane-enclosed lumen lytic vacuole cytoplasmic vesicle lumen vacuolar lumen endomembrane system intracellular organelle lumen intracellular organelle cytoplasmic vesicle vesicle lysosome acrosomal vesicle membrane-bounded organelle intracellular anatomical structure intracellular vesicle membrane-enclosed lumen lytic vacuole cytoplasmic vesicle lumen vacuolar lumen endomembrane system intracellular organelle lumen intracellular organelle cytoplasmic vesicle vesicle lysosome acrosomal vesicle vesicle lumen vacuole cellular anatomical entity intracellular membrane-bounded organelle secretory granule lumen acrosomal lumen lysosomal lumen organelle lumen organelle secretory granule secretory vesicle cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR035916	Egg-lysin superfamily	Homologous Superfamily
A, B, C, D	IPR001379	Egg lysin (Sperm-lysin)	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.