2LUU | pdb_00002luu

NMR solution structure of midkine-b, mdkb

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PTN_MK_N	e2luuA1	A: a/b three-layered sandwiches	X: Ribosomal protein L25-like	H: 40S ribosomal protein S3A N-terminal domain	T: 40S ribosomal protein S3A N-terminal domain	F: PTN_MK_N	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01091	PTN/MK heparin-binding protein family, C-terminal domain (PTN_MK_C)	PTN/MK heparin-binding protein family, C-terminal domain		Domain
A	PF05196	PTN/MK heparin-binding protein family, N-terminal domain (PTN_MK_N)	PTN/MK heparin-binding protein family, N-terminal domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Midkine-related growth factor Mdk2	molecular function activator activity molecular function regulator activity signaling receptor regulator activity growth factor activity receptor ligand activity signaling receptor activator activity heparin binding glycosaminoglycan binding binding carbohydrate derivative binding sulfur compound binding	developmental process multicellular organism development multicellular organismal process head development central nervous system development anatomical structure development animal organ development brain development nervous system development system development regulation of cellular process cellular developmental process regulation of developmental process positive regulation of biological process developmental process multicellular organism development multicellular organismal process head development central nervous system development anatomical structure development animal organ development brain development nervous system development system development regulation of cellular process cellular developmental process regulation of developmental process positive regulation of biological process regulation of cell differentiation positive regulation of neuron differentiation positive regulation of developmental process neurogenesis neuron differentiation positive regulation of cell differentiation cell differentiation positive regulation of cellular process regulation of biological process biological regulation generation of neurons cellular process regulation of neuron differentiation chordate embryonic development mesenchyme development embryo development tissue development neural crest formation epithelial to mesenchymal transition anatomical structure morphogenesis embryo development ending in birth or egg hatching anatomical structure formation involved in morphogenesis mesenchymal cell differentiation positive regulation of cell division cell division regulation of cell division	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR020090	Pleiotrophin/Midkine, C-terminal domain	Domain
A	IPR020089	Pleiotrophin/Midkine, N-terminal domain	Domain
A	IPR000762	Midkine heparin-binding growth factor	Family
A	IPR037122	Pleiotrophin/Midkine, N-terminal domain superfamily	Homologous Superfamily
A	IPR020091	Pleiotrophin/Midkine disulphide-rich domain superfamily	Homologous Superfamily
A	IPR038130	Pleiotrophin/Midkine, C-terminal domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.