2KQ9

Solution structure of DnaK suppressor protein from Agrobacterium tumefaciens C58. Northeast Structural Genomics Consortium target AtT12/Ontario Center for Structural Proteomics Target atc0888

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DksA_like	e2kq9A1	A: alpha bundles	X: Long alpha-hairpin	H: DnaK suppressor protein DksA, alpha-hairpin domain (From Topology)	T: DnaK suppressor protein DksA, alpha-hairpin domain	F: DksA_like	ECOD (1.6)
A	zf-dskA_traR	e2kq9A4	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: zf-dskA_traR	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.120.910	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	DksA, coiled-coil domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF21173	DnaK suppressor protein-like, N-terminal domain (DksA-like_N)	DnaK suppressor protein-like, N-terminal domain	This domain is found at the N-terminal end of DnaK suppressor protein from Agrobacterium fabrum (DksA) and similar proteins predominantly found in Alphaproteobacteria. This domain shows an all-alpha structure and is often found N-terminal to Pfam:PF ...	This domain is found at the N-terminal end of DnaK suppressor protein from Agrobacterium fabrum (DksA) and similar proteins predominantly found in Alphaproteobacteria. This domain shows an all-alpha structure and is often found N-terminal to Pfam:PF01258.	Domain
A	PF01258	Prokaryotic dksA/traR C4-type zinc finger (zf-dskA_traR)	Prokaryotic dksA/traR C4-type zinc finger	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	DnaK suppressor protein	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR037187	DksA, N-terminal domain superfamily	Homologous Superfamily
A	IPR000962	Zinc finger, DksA/TraR C4-type	Domain
A	IPR048487	DnaK suppressor protein-like, N-terminal domain	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.