2KJ3 | pdb_00002kj3

High-resolution structure of the HET-s(218-289) prion in its amyloid form obtained by solid-state NMR

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyHET-s amyloid forming segment-like 8053461 3002192 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyHET-s amyloid forming segment-like 8053461 3002192 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyHET-s amyloid forming segment-like 8053461 3002192 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHET-s_218-289e2kj3A1 A: a/b three-layered sandwichesX: Midkine-relatedH: Midkine-relatedT: Midkine-relatedF: HET-s_218-289ECOD (v294.1)
CPBPe2kj3C1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (v294.1)
BPBPe2kj3B1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Small s protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR038305HeLo domain superfamilyHomologous Superfamily
A, B, C
IPR021084Het-s prion-forming domainDomain
A, B, C
IPR029498Prion-inhibition and propagation, HeLo domainDomain