2JJZ | pdb_00002jjz

Crystal Structure of Human Iba2, orthorhombic crystal form

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	MR_MLE_N	e2jjzA1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: MR_MLE_N	ECOD (v294.1)
D	DNA_ligase_aden,Nlig-Ia	e2jjzD2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: DNA_ligase_aden,Nlig-Ia	ECOD (v294.1)
C	Ribosomal_L36	e2jjzC1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (v294.1)
B	Ribosomal_L36	e2jjzB1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	IONIZED CALCIUM-BINDING ADAPTER MOLECULE 2	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding cytoskeletal protein binding actin binding protein-containing complex binding protein binding actin filament binding	plasma membrane bounded cell projection organization ruffle organization cell projection organization plasma membrane bounded cell projection assembly ruffle assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly actin cytoskeleton organization actin filament organization organelle organization plasma membrane bounded cell projection organization ruffle organization cell projection organization plasma membrane bounded cell projection assembly ruffle assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly actin cytoskeleton organization actin filament organization organelle organization actin filament bundle organization actin filament bundle assembly actin filament-based process supramolecular fiber organization cytoskeleton organization	cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction ruffle cell leading edge plasma membrane membrane leading edge membrane plasma membrane bounded cell projection cell periphery cell projection ruffle membrane cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction ruffle cell leading edge plasma membrane membrane leading edge membrane plasma membrane bounded cell projection cell periphery cell projection ruffle membrane plasma membrane region cell projection membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle intracellular organelle intracellular anatomical structure cytoskeleton membraneless organelle intracellular membraneless organelle actin cytoskeleton
B, C, D	IONIZED CALCIUM-BINDING ADAPTER MOLECULE 2	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding cytoskeletal protein binding actin binding protein-containing complex binding protein binding actin filament binding	plasma membrane bounded cell projection organization ruffle organization cell projection organization plasma membrane bounded cell projection assembly ruffle assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly actin cytoskeleton organization actin filament organization organelle organization plasma membrane bounded cell projection organization ruffle organization cell projection organization plasma membrane bounded cell projection assembly ruffle assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly actin cytoskeleton organization actin filament organization organelle organization actin filament bundle organization actin filament bundle assembly actin filament-based process supramolecular fiber organization cytoskeleton organization	cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction ruffle cell leading edge plasma membrane membrane leading edge membrane plasma membrane bounded cell projection cell periphery cell projection ruffle membrane cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction ruffle cell leading edge plasma membrane membrane leading edge membrane plasma membrane bounded cell projection cell periphery cell projection ruffle membrane plasma membrane region cell projection membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle intracellular organelle intracellular anatomical structure cytoskeleton membraneless organelle intracellular membraneless organelle actin cytoskeleton

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR049025	Allograft inflammatory factor 1-like, EF-hand domain pair	Domain
A	IPR002048	EF-hand domain	Domain
A	IPR011992	EF-hand domain pair	Homologous Superfamily
A	IPR042433	Allograft inflammatory factor 1	Family
B, C, D	IPR049025	Allograft inflammatory factor 1-like, EF-hand domain pair	Domain
B, C, D	IPR002048	EF-hand domain	Domain
B, C, D	IPR011992	EF-hand domain pair	Homologous Superfamily
B, C, D	IPR042433	Allograft inflammatory factor 1	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q9BQI0	adrenal cortex carcinoma breast carcinoma large cell medulloblastoma medulloblastoma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm subependymal giant cell astrocytoma atypical teratoid rhabdoid tumor cystic fibrosis lung adenocarcinoma non-small cell lung carcinoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia breast cancer invasive ductal breast carcinoma adrenal cortex carcinoma breast carcinoma large cell medulloblastoma medulloblastoma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm subependymal giant cell astrocytoma atypical teratoid rhabdoid tumor cystic fibrosis lung adenocarcinoma non-small cell lung carcinoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia breast cancer invasive ductal breast carcinoma malignant ependymoma oral cavity cancer pancreatic intraductal papillary-mucinous carcinoma spina bifida
B, C, D	Pharos: Q9BQI0	adrenal cortex carcinoma breast carcinoma large cell medulloblastoma medulloblastoma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm subependymal giant cell astrocytoma atypical teratoid rhabdoid tumor cystic fibrosis lung adenocarcinoma non-small cell lung carcinoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia breast cancer invasive ductal breast carcinoma adrenal cortex carcinoma breast carcinoma large cell medulloblastoma medulloblastoma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm subependymal giant cell astrocytoma atypical teratoid rhabdoid tumor cystic fibrosis lung adenocarcinoma non-small cell lung carcinoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia breast cancer invasive ductal breast carcinoma malignant ependymoma oral cavity cancer pancreatic intraductal papillary-mucinous carcinoma spina bifida

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.