Structure of the RNAi polymerase from Neurospora crassa
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | RdRP-like | 8046930 | 4005374 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Two-barrel nucleic acid polymerases | 8055682 | 3001330 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Two-barrel nucleic acid polymerases | 8055683 | 3001330 | SCOP2 (2022-06-29) |
| B | SCOP2B Superfamily | Two-barrel nucleic acid polymerases | 8055682 | 3001330 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Two-barrel nucleic acid polymerases | 8055683 | 3001330 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | RdRP | e2j7nA1 | A: a/b three-layered sandwiches | X: cradle loop barrel | H: RIFT-related | T: double psi | F: RdRP | ECOD (v294.1) |
| A | RdRP | e2j7nA2 | A: a/b three-layered sandwiches | X: cradle loop barrel | H: RIFT-related | T: double psi | F: RdRP | ECOD (v294.1) |
| A | RdRP | e2j7nA4 | A: a/b three-layered sandwiches | X: Four-helical up-and-down bundle | H: RNAi polymerase helical domain | T: RNAi polymerase helical domain | F: RdRP | ECOD (v294.1) |
| B | Dynamin_M,GED | e2j7nB1 | A: a/b three-layered sandwiches | X: Middle and GTPase effector domains in dynamin-related proteins | H: Middle and GTPase effector domains in dynamin-related proteins | T: Middle and GTPase effector domains in dynamin-related proteins | F: Dynamin_M,GED | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.10.8.790 | Mainly Alpha | Orthogonal Bundle | Helicase, Ruva Protein | domain 3 | CATH (4.3.0) |
| B | 1.10.8.790 | Mainly Alpha | Orthogonal Bundle | Helicase, Ruva Protein | domain 3 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR057596 | RDRP, core domain | Domain | |
| IPR007855 | RNA-dependent RNA polymerase | Family |














