Crystal Structure of Soybean Lipoxygenase-B
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d2iuja2 | All alpha proteins | Lipoxigenase | Lipoxigenase | Plant lipoxigenases | automated matches | SOYBEAN (Glycine max ) [TaxId: 3847 ], | SCOPe (2.08) |
| A | d2iuja1 | All beta proteins | Lipase/lipooxygenase domain (PLAT/LH2 domain) | Lipase/lipooxygenase domain (PLAT/LH2 domain) | automated matches | automated matches | SOYBEAN (Glycine max ) [TaxId: 3847 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | Lipoxygenase catalytic domain-like | 8099439 | 4001373 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | Lipoxygenase N-terminal domain-like | 8101059 | 4002389 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Lipoxygenase | 8099440 | 3001410 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 8101060 | 3001168 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | PLAT | e2iujA4 | A: beta sandwiches | X: jelly-roll | H: Lipase/lipooxygenase domain (PLAT/LH2 domain) (From Topology) | T: Lipase/lipooxygenase domain (PLAT/LH2 domain) | F: PLAT | ECOD (1.6) |
| A | Lipoxygenase | e2iujA3 | A: alpha bundles | X: Lipoxygenase (From Topology) | H: Lipoxygenase (From Topology) | T: Lipoxygenase | F: Lipoxygenase | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.60.20 | Mainly Beta | Sandwich | Lipoxygenase-1 | PLAT/LH2 domain | CATH (4.3.0) |
| A | 4.10.375.10 | Few Secondary Structures | Irregular | Lipoxygenase-1 | domain 2 | CATH (4.3.0) |
| A | 4.10.372.10 | Few Secondary Structures | Irregular | Lipoxygenase-1 | domain 3 | CATH (4.3.0) |
| A | 3.10.450.60 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
| A | 1.20.245.10 | Mainly Alpha | Up-down Bundle | Lipoxygenase-1 | domain 5 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR020834 | Lipoxygenase, conserved site | Conserved Site | |
| IPR036392 | PLAT/LH2 domain superfamily | Homologous Superfamily | |
| IPR027433 | Lipoxygenase, domain 3 | Homologous Superfamily | |
| IPR001024 | PLAT/LH2 domain | Domain | |
| IPR036226 | Lipoxigenase, C-terminal domain superfamily | Homologous Superfamily | |
| IPR001246 | Lipoxygenase, plant | Family | |
| IPR042057 | Plant lipoxygenase, PLAT/LH2 domain | Domain | |
| IPR000907 | Lipoxygenase | Family | |
| IPR020833 | Lipoxygenase, iron binding site | Binding Site | |
| IPR013819 | Lipoxygenase, C-terminal | Domain |














