2IPQ | pdb_00002ipq

Crystal structure of C-terminal domain of Salmonella Enterica protein STY4665, PFAM DUF1528

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A [auth X]	d2ipqx1	All alpha proteins	DNA/RNA-binding 3-helical bundle	'Winged helix' DNA-binding domain	STY4665 C-terminal domain-like	Hypothetical protein STY4665	(Salmonella enterica subsp. enterica serovar Typhi ) [TaxId: 90370 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth X]	SCOP2 Family	STY4665 C-terminal domain-like	8002976	4000186	SCOP2 (2022-06-29)
A [auth X]	SCOP2 Superfamily	Winged helix DNA-binding domain	8002977	3000034	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth X]		e2ipqX1	A: HTH	X: HTH	H: winged helix domain	T: TraI_2_C	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A [auth X]	1.10.10.10	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	CATH (4.3.0)
A [auth X]	2.40.10.200	Mainly Beta	Beta Barrel	Thrombin, subunit H	STY4665 C-terminal domain-like	CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth X]	IPR022391	Integrating conjugative element relaxase, PFGI-1 class	Domain
A [auth X]	IPR011093	Putative conjugal transfer nickase/helicase TraI, C-terminal	Domain
A [auth X]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
A [auth X]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
A [auth X]	IPR011119	Uncharacterised domain, helicase/relaxase, putative	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.