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 2IOJ | pdb_00002ioj

Crystal structure of protein AF1212 from Archaeoglobus fulgidus, Pfam DRTGG

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd2iojb_ Alpha and beta proteins (a/b) MurF and HprK N-domain-like HprK N-terminal domain-like DRTGG domain Hypothetical protein AF1212 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
Ad2ioja1 Alpha and beta proteins (a/b) MurF and HprK N-domain-like HprK N-terminal domain-like DRTGG domain Hypothetical protein AF1212 (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyHprK N-terminal domain-like 8018066 3001032 SCOP2B (2022-06-29)
ASCOP2 FamilyDRTGG domain 8018065 4002078 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyHprK N-terminal domain-like 8018066 3001032 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BGlyco_hydro_20be2iojB1 A: alpha arraysX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: C-terminal subdomain in Lon-related proteases catalytic domainsF: Glyco_hydro_20bECOD (v295.2)
ADRTGGe2iojA1 A: alpha arraysX: MurF and HprK N-domain-likeH: MurF and HprK N-domain-likeT: MurF and HprK N-domain-likeF: DRTGGECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.1390.20 Alpha Beta 3-Layer(aba) Sandwich Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase Chain: A, domain 1CATH (4.3.0)
A3.40.1390.20 Alpha Beta 3-Layer(aba) Sandwich Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase Chain: A, domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF07085DRTGG domain (DRTGG)DRTGG domainThis presumed domain is about 120 amino acids in length. It is found associated with CBS domains Pfam:PF00571, as well as the CbiA domain Pfam:PF01656. The function of this domain is unknown. It is named the DRTGG domain after some of the most conse ...This presumed domain is about 120 amino acids in length. It is found associated with CBS domains Pfam:PF00571, as well as the CbiA domain Pfam:PF01656. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea (Bateman A, pers. obs.).
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR050500Phosphate Acetyltransferase/ButyryltransferaseFamily
A, B
IPR010766DRTGGDomain
A, B
IPR028979HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamilyHomologous Superfamily
A, B
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily