2I2L

X-ray Crystal Structure of Protein yopX from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR411.

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2i2la1	All beta proteins	YopX-like	YopX-like	YopX-like	Hypothetical protein YopX	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
B	d2i2lb2	All beta proteins	YopX-like	YopX-like	YopX-like	Hypothetical protein YopX	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
B	d2i2lb3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
C	d2i2lc_	All beta proteins	YopX-like	YopX-like	YopX-like	Hypothetical protein YopX	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	YopX-like	8021983	4001651	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YopX-like	8034363	3000201	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	YopX-like	8034363	3000201	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	YopX-like	8034363	3000201	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF09643	e2i2lA1	A: beta barrels	X: YopX, C-terminal domain-like (From Topology)	H: YopX, C-terminal domain-like (From Topology)	T: YopX, C-terminal domain-like	F: PF09643	ECOD (1.6)
A	PF09643	e2i2lA2	A: beta duplicates or obligate multimers	X: YopX, N-terminal domain-like (From Topology)	H: YopX, N-terminal domain-like (From Topology)	T: YopX, N-terminal domain-like	F: PF09643	ECOD (1.6)
B	PF09643	e2i2lB1	A: beta barrels	X: YopX, C-terminal domain-like (From Topology)	H: YopX, C-terminal domain-like (From Topology)	T: YopX, C-terminal domain-like	F: PF09643	ECOD (1.6)
B	PF09643	e2i2lB2	A: beta duplicates or obligate multimers	X: YopX, N-terminal domain-like (From Topology)	H: YopX, N-terminal domain-like (From Topology)	T: YopX, N-terminal domain-like	F: PF09643	ECOD (1.6)
C	PF09643	e2i2lC1	A: beta barrels	X: YopX, C-terminal domain-like (From Topology)	H: YopX, C-terminal domain-like (From Topology)	T: YopX, C-terminal domain-like	F: PF09643	ECOD (1.6)
C	PF09643	e2i2lC2	A: beta duplicates or obligate multimers	X: YopX, N-terminal domain-like (From Topology)	H: YopX, N-terminal domain-like (From Topology)	T: YopX, N-terminal domain-like	F: PF09643	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.10.70.50	Mainly Beta	Ribbon	Complement Module	domain 1	CATH (4.3.0)
A	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
B	2.10.70.50	Mainly Beta	Ribbon	Complement Module	domain 1	CATH (4.3.0)
B	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
C	2.10.70.50	Mainly Beta	Ribbon	Complement Module	domain 1	CATH (4.3.0)
C	2.30.30.100	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF09643	YopX protein (YopX)	YopX protein	YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR019096	YopX protein	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.