Crystal structure of fragment D from Human Fibrinogen Complexed with Gly-Pro-Arg-Pro-amide.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| J | d2hpcj1 | Coiled coil proteins | Parallel coiled-coil | Fibrinogen coiled-coil and central regions | Fibrinogen coiled-coil and central regions | Fibrinogen alpha chain | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| G | d2hpcg1 | Coiled coil proteins | Parallel coiled-coil | Fibrinogen coiled-coil and central regions | Fibrinogen coiled-coil and central regions | Fibrinogen alpha chain | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| D | d2hpcd1 | Coiled coil proteins | Parallel coiled-coil | Fibrinogen coiled-coil and central regions | Fibrinogen coiled-coil and central regions | Fibrinogen alpha chain | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| A | d2hpca1 | Coiled coil proteins | Parallel coiled-coil | Fibrinogen coiled-coil and central regions | Fibrinogen coiled-coil and central regions | Fibrinogen alpha chain | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| L | Chloroa_b-bind | e2hpcL1 | A: alpha arrays | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: Chloroa_b-bind | ECOD (v295.2) |
| I | Chloroa_b-bind | e2hpcI1 | A: alpha arrays | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: Chloroa_b-bind | ECOD (v295.2) |
| F | Chloroa_b-bind | e2hpcF1 | A: alpha arrays | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: Chloroa_b-bind | ECOD (v295.2) |
| C | Chloroa_b-bind | e2hpcC1 | A: alpha arrays | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: Chloroa_b-bind | ECOD (v295.2) |
| K | Chloroa_b-bind | e2hpcK1 | A: alpha arrays | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: Chloroa_b-bind | ECOD (v295.2) |
| H | Chloroa_b-bind | e2hpcH1 | A: alpha arrays | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: Chloroa_b-bind | ECOD (v295.2) |
| E | Chloroa_b-bind | e2hpcE1 | A: alpha arrays | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: Chloroa_b-bind | ECOD (v295.2) |
| B | Chloroa_b-bind | e2hpcB1 | A: alpha arrays | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: Chloroa_b-bind | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00147 | Fibrinogen beta and gamma chains, C-terminal globular domain (Fibrinogen_C) | Fibrinogen beta and gamma chains, C-terminal globular domain | Domain | ||
| PF00147 | Fibrinogen beta and gamma chains, C-terminal globular domain (Fibrinogen_C) | Fibrinogen beta and gamma chains, C-terminal globular domain | Domain | ||
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR037579 | Fibrinogen/angiopoietin-like | Family | |
| IPR012290 | Fibrinogen, alpha/beta/gamma chain, coiled coil domain | Domain | |
| IPR020837 | Fibrinogen, conserved site | Conserved Site | |
| IPR014716 | Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 | Homologous Superfamily | |
| IPR002181 | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | Domain | |
| IPR036056 | Fibrinogen-like, C-terminal | Homologous Superfamily | |
| IPR037579 | Fibrinogen/angiopoietin-like | Family | |
| IPR012290 | Fibrinogen, alpha/beta/gamma chain, coiled coil domain | Domain | |
| IPR020837 | Fibrinogen, conserved site | Conserved Site | |
| IPR021996 | Fibrinogen alpha C domain | Domain | |
| IPR014716 | Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 | Homologous Superfamily | |
| IPR002181 | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | Domain | |
| IPR036056 | Fibrinogen-like, C-terminal | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| NH2 | :  AA0081 , AA0083 , AA0084 , AA0086 , AA0087 , AA0088 , AA0090 , AA0091 , AA0092 , AA0093 , AA0095 , AA0096 , AA0097 , AA0098 , AA0099 , AA0100 :  L-alanine amide MOD:00090 , L-asparagine amide MOD:00092 , L-aspartic acid 1-amide MOD:00093 , L-glutamine amide MOD:00095 , L-glutamic acid 1-amide MOD:00096 , glycine amide MOD:00097 , L-isoleucine amide MOD:00099 , L-leucine amide MOD:00100 , L-lysine amide MOD:00101 , L-methionine amide MOD:00102 , L-proline amide MOD:00104 , L-serine amide MOD:00105 , L-threonine amide MOD:00106 , L-tryptophan amide MOD:00107 , L-tyrosine amide MOD:00108 , L-valine amide MOD:00109 | |