2HJJ

Solution NMR structure of protein ykfF from Escherichia coli. Northeast Structural Genomics target ER397.

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2hjja1	Alpha and beta proteins (a+b)	dsRBD-like	YcfA/nrd intein domain	YkfF-like	Hypothetical protein YkfF	(Escherichia coli K-12 ) [TaxId: 83333 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	YkfF-like	8021841	4001816	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YcfA/nrd intein domain	8034221	3001014	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF905	e2hjjA1	A: a+b two layers	X: dsRBD-like	H: PI-Pfui intein middle domain (From Topology)	T: PI-Pfui intein middle domain	F: DUF905	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.160.130	Alpha Beta	2-Layer Sandwich	Double Stranded RNA Binding Domain	ykff protein like domains	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF06006	Bacterial protein of unknown function (DUF905) (DUF905)	Bacterial protein of unknown function (DUF905)	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR038612	YkfF-like domain superfamily	Homologous Superfamily
A	IPR009253	Protein of unknown function DUF905	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.