X-Ray Crystal Structure of the Metal-containing Protein AF0104 from Archaeoglobus fulgidus. Northeast Structural Genomics Consortium Target GR103.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | d2h6lc2 | Alpha and beta proteins (a+b) | AF0104/ALDC/Ptd012-like | AF0104/ALDC/Ptd012-like | AF0104-like | automated matches | (Archaeoglobus fulgidus ) [TaxId: 2234 ], | SCOPe (2.08) |
| C | d2h6lc3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Archaeoglobus fulgidus ) [TaxId: 2234 ], | SCOPe (2.08) |
| B | d2h6lb2 | Alpha and beta proteins (a+b) | AF0104/ALDC/Ptd012-like | AF0104/ALDC/Ptd012-like | AF0104-like | automated matches | (Archaeoglobus fulgidus ) [TaxId: 2234 ], | SCOPe (2.08) |
| B | d2h6lb3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Archaeoglobus fulgidus ) [TaxId: 2234 ], | SCOPe (2.08) |
| A | d2h6la1 | Alpha and beta proteins (a+b) | AF0104/ALDC/Ptd012-like | AF0104/ALDC/Ptd012-like | AF0104-like | Hypothetical protein AF0104 | (Archaeoglobus fulgidus ) [TaxId: 2234 ], | SCOPe (2.08) |
| A | d2h6la2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Archaeoglobus fulgidus ) [TaxId: 2234 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C | SCOP2B Superfamily | AF0104/ALDC/Ptd012-like | 8042177 | 3001273 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | AF0104/ALDC/Ptd012-like | 8042177 | 3001273 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | AF0104-like | 8029798 | 4003446 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | AF0104/ALDC/Ptd012-like | 8042177 | 3001273 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | Glyco_hydro_18 | e2h6lC1 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: Glyco_hydro_18 | ECOD (v294.1) |
| B | Glyco_hydro_18 | e2h6lB1 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: Glyco_hydro_18 | ECOD (v294.1) |
| A | PCC | e2h6lA1 | A: a+b two layers | X: AF0104/ALDC/Ptd012-like | H: AF0104/ALDC/Ptd012-like | T: AF0104/ALDC/Ptd012-like | F: PCC | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 3.30.1330.80 | Alpha Beta | 2-Layer Sandwich | 60s Ribosomal Protein L30 | Chain: A | CATH (4.3.0) |
| B | 3.30.1330.80 | Alpha Beta | 2-Layer Sandwich | 60s Ribosomal Protein L30 | Chain: A | CATH (4.3.0) |
| A | 3.30.1330.80 | Alpha Beta | 2-Layer Sandwich | 60s Ribosomal Protein L30 | Chain: A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF03479 | Plants and Prokaryotes Conserved (PCC) domain (PCC) | Plants and Prokaryotes Conserved (PCC) domain | This is a Plants and Prokaryotes Conserved (PPC) domain found in proteins that contain AT-hook motifs Pfam:PF02178 which strongly suggests a DNA-binding function for the proteins as a whole. Proteins with PPC domains are found in Bacteria, Archaea an ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Hypothetical protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR005175 | PPC domain | Domain | |
| IPR025707 | Predicted DNA-binding protein with PD1-like DNA-binding motif | Family |














