X-ray Crystal Structure of Protein yonK from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR415
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | d2h4od_ | Alpha and beta proteins (a+b) | YonK-like | YonK-like | Yonk-like | Uncharacterized protein YonK | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
| C | d2h4oc_ | Alpha and beta proteins (a+b) | YonK-like | YonK-like | Yonk-like | Uncharacterized protein YonK | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
| B | d2h4ob_ | Alpha and beta proteins (a+b) | YonK-like | YonK-like | Yonk-like | Uncharacterized protein YonK | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
| A | d2h4oa1 | Alpha and beta proteins (a+b) | YonK-like | YonK-like | Yonk-like | Uncharacterized protein YonK | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D | SCOP2B Superfamily | YonK-like | 8034155 | 3000968 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | YonK-like | 8034155 | 3000968 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | YonK-like | 8034155 | 3000968 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | Yonk-like | 8021775 | 4002220 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | YonK-like | 8034155 | 3000968 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | PCNA_N | e2h4oD1 | A: beta barrels | X: HTH | H: Nudix | T: winged helix domain | F: PCNA_N | ECOD (v294.2) |
| C | YonK | e2h4oC1 | A: beta barrels | X: DP domain | H: DP domain | T: DP domain | F: YonK | ECOD (v294.2) |
| B | YonK | e2h4oB1 | A: few secondary structure elements | X: Yonk-like | H: Yonk-like | T: Yonk-like | F: YonK | ECOD (v294.2) |
| A | DNA_binding_1 | e2h4oA1 | A: beta barrels | X: Globin-like | H: Globin-like | T: Globin-like | F: DNA_binding_1 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 6.20.120.10 | Special | Other non-globular | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) | |
| C | 6.20.120.10 | Special | Other non-globular | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) | |
| B | 6.20.120.10 | Special | Other non-globular | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) | |
| A | 6.20.120.10 | Special | Other non-globular | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) |
