Crystal Structure of LpqW
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | e2grvC1 | A: Thymine dioxygenase JBP1 DNA-binding domain-like | X: Oligo-peptide binding protein (OPPA) insertion domain | H: Oligo-peptide binding protein (OPPA) insertion domain | T: SBP_bac_5 | F: | ECOD (20:10:01) | |
| B | e2grvB1 | A: MocoBD/DmpA-related | X: MocoBD/DmpA-related | H: Retrovirus capsid protein-C | T: Ldh_1_C | F: | ECOD (20:10:01) | |
| A | e2grvA1 | A: MocoBD/DmpA-related | X: MocoBD/DmpA-related | H: Retrovirus capsid protein-C | T: Ldh_1_C | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| C | 3.90.76.10 | Alpha Beta | Alpha-Beta Complex | Dipeptide-binding Protein | domain 1 | CATH (4.3.0) |
| C | 3.10.105.10 | Alpha Beta | Roll | Dipeptide-binding Protein | domain 3 | CATH (4.3.0) |
| B | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| B | 3.90.76.10 | Alpha Beta | Alpha-Beta Complex | Dipeptide-binding Protein | domain 1 | CATH (4.3.0) |
| B | 3.10.105.10 | Alpha Beta | Roll | Dipeptide-binding Protein | domain 3 | CATH (4.3.0) |
| A | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| A | 3.90.76.10 | Alpha Beta | Alpha-Beta Complex | Dipeptide-binding Protein | domain 1 | CATH (4.3.0) |
| A | 3.10.105.10 | Alpha Beta | Roll | Dipeptide-binding Protein | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00496 | Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5) | Bacterial extracellular solute-binding proteins, family 5 Middle | The borders of this family are based on the PDBSum definitions of the domain edges for Swiss:P06202. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR000914 | Solute-binding protein family 5 domain | Domain | |
| IPR039424 | Solute-binding protein family 5 | Family |














