2GA1
Crystal structure of a duf433 member protein (ava_0674) from anabaena variabilis atcc 29413 at 2.00 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2ga1a1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | Homeodomain-like | Alr1493-like | Hypothetical protein Ava_0674 (Alr1493 orthologue) | (Trichormus variabilis ATCC 29413 ) [TaxId: 240292 ], | SCOPe (2.08) |
A | d2ga1a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Trichormus variabilis ATCC 29413 ) [TaxId: 240292 ], | SCOPe (2.08) |
B | d2ga1b_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | Homeodomain-like | Alr1493-like | Hypothetical protein Ava_0674 (Alr1493 orthologue) | (Trichormus variabilis ATCC 29413 ) [TaxId: 240292 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Alr1493-like | 8002319 | 4000248 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Homeodomain-like | 8002320 | 3000001 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Alr1493 dimerisation region-like | 8056298 | 3002341 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Alr1493 dimerisation region-like | 8056298 | 3002341 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Homeodomain-like | 8002320 | 3000001 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.5.800 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Alr1493-like domains | CATH (4.3.0) |
A | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
B | 1.20.5.800 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Alr1493-like domains | CATH (4.3.0) |
B | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04255 | Protein of unknown function (DUF433) (DUF433) | Protein of unknown function (DUF433) | - | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009057 | Homedomain-like superfamily | Homologous Superfamily | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR007367 | Protein of unknown function DUF433 | Family |