Crystal structure of the novel green fluorescent protein from marine copepod Pontellina plumata
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | d2g6yd_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | automated matches | automated matches | (Pontellina plumata ) [TaxId: 239963 ], | SCOPe (2.08) |
| C | d2g6yc_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | automated matches | automated matches | (Pontellina plumata ) [TaxId: 239963 ], | SCOPe (2.08) |
| B | d2g6yb1 | Alpha and beta proteins (a+b) | GFP-like | GFP-like | automated matches | automated matches | (Pontellina plumata ) [TaxId: 239963 ], | SCOPe (2.08) |
| B | d2g6yb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Pontellina plumata ) [TaxId: 239963 ], | SCOPe (2.08) |
| A | d2g6ya_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | automated matches | automated matches | (Pontellina plumata ) [TaxId: 239963 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | Hepar_II_III | e2g6yD1 | A: alpha bundles | X: HTH | H: Nudix | T: winged helix domain | F: Hepar_II_III | ECOD (develop294) |
| C | Hepar_II_III | e2g6yC1 | A: alpha bundles | X: HTH | H: Nudix | T: winged helix domain | F: Hepar_II_III | ECOD (develop294) |
| B | Hepar_II_III | e2g6yB1 | A: alpha bundles | X: HTH | H: Nudix | T: winged helix domain | F: Hepar_II_III | ECOD (develop294) |
| A | Hepar_II_III | e2g6yA1 | A: alpha bundles | X: HTH | H: Nudix | T: winged helix domain | F: Hepar_II_III | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
| C | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
| B | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
| A | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| green fluorescent protein 2 | - | - |
