2G0J | pdb_00002g0j

Crystal structure of SMU.848 from Streptococcus mutans

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d2g0jd2	Alpha and beta proteins (a+b)	eIF1-like	TM1457-like	TM1457-like	Hypothetical protein Smu.848	(Streptococcus mutans ) [TaxId: 1309 ],	SCOPe (2.08)
D	d2g0jd3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Streptococcus mutans ) [TaxId: 1309 ],	SCOPe (2.08)
C	d2g0jc2	Alpha and beta proteins (a+b)	eIF1-like	TM1457-like	TM1457-like	Hypothetical protein Smu.848	(Streptococcus mutans ) [TaxId: 1309 ],	SCOPe (2.08)
C	d2g0jc3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Streptococcus mutans ) [TaxId: 1309 ],	SCOPe (2.08)
B	d2g0jb2	Alpha and beta proteins (a+b)	eIF1-like	TM1457-like	TM1457-like	Hypothetical protein Smu.848	(Streptococcus mutans ) [TaxId: 1309 ],	SCOPe (2.08)
B	d2g0jb3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Streptococcus mutans ) [TaxId: 1309 ],	SCOPe (2.08)
A	d2g0ja2	Alpha and beta proteins (a+b)	eIF1-like	TM1457-like	TM1457-like	Hypothetical protein Smu.848	(Streptococcus mutans ) [TaxId: 1309 ],	SCOPe (2.08)
A	d2g0ja3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Streptococcus mutans ) [TaxId: 1309 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	TM1457-like	8034023	3001371	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	TM1457-like	8034023	3001371	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	TM1457-like	8034023	3001371	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	TM1457-like	8034023	3001371	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Peptidase_Prp	e2g0jD1	A: a+b two layers	X: Glucose permease domain IIB-like	H: TM1457-like (From Topology)	T: TM1457-like	F: Peptidase_Prp	ECOD (1.6)
C	Peptidase_Prp	e2g0jC1	A: a+b two layers	X: Glucose permease domain IIB-like	H: TM1457-like (From Topology)	T: TM1457-like	F: Peptidase_Prp	ECOD (1.6)
B	Peptidase_Prp	e2g0jB1	A: a+b two layers	X: Glucose permease domain IIB-like	H: TM1457-like (From Topology)	T: TM1457-like	F: Peptidase_Prp	ECOD (1.6)
A	Peptidase_Prp	e2g0jA1	A: a+b two layers	X: Glucose permease domain IIB-like	H: TM1457-like (From Topology)	T: TM1457-like	F: Peptidase_Prp	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.30.70.1490	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Cysteine protease Prp	CATH (4.3.0)
C	3.30.70.1490	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Cysteine protease Prp	CATH (4.3.0)
B	3.30.70.1490	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Cysteine protease Prp	CATH (4.3.0)
A	3.30.70.1490	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Cysteine protease Prp	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF04327	Cysteine protease Prp (Peptidase_Prp)	Cysteine protease Prp	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	hypothetical protein SMU.848	cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular component organization or biogenesis	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR036764	Cysteine protease Prp superfamily	Homologous Superfamily
A, B, C, D	IPR007422	Cysteine protease Prp	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.