2FVH | pdb_00002fvh

Crystal Structure of Rv1848, a Urease Gamma Subunit UreA (Urea amidohydrolase), from Mycobacterium Tuberculosis

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2fvha_	Alpha and beta proteins (a+b)	Urease, gamma-subunit	Urease, gamma-subunit	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
B	d2fvhb_	Alpha and beta proteins (a+b)	Urease, gamma-subunit	Urease, gamma-subunit	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)
C	d2fvhc_	Alpha and beta proteins (a+b)	Urease, gamma-subunit	Urease, gamma-subunit	automated matches	automated matches	(Mycobacterium tuberculosis ) [TaxId: 1773 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Urease, gamma-subunit	8078162	4000909	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Urease, gamma-subunit	8078163	3001945	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Urease, gamma-subunit	8078163	3001945	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Urease, gamma-subunit	8078163	3001945	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	C1-set	e2fvhA1	A: a/b three-layered sandwiches	X: Globin-like	H: Globin-like	T: Globin-like	F: C1-set	ECOD (v294.1)
B	Hepar_II_III	e2fvhB1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: Hepar_II_III	ECOD (v294.1)
C	Hepar_II_III	e2fvhC1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: Hepar_II_III	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.280.10	Alpha Beta	2-Layer Sandwich	Urease	subunit A	CATH (4.3.0)
B	3.30.280.10	Alpha Beta	2-Layer Sandwich	Urease	subunit A	CATH (4.3.0)
C	3.30.280.10	Alpha Beta	2-Layer Sandwich	Urease	subunit A	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	Urease gamma subunit	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides hydrolase activity urease activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds cation binding transition metal ion binding ion binding binding nickel cation binding metal ion binding small molecule binding	cellular response to stimulus response to nutrient levels cellular response to nitrogen levels response to stimulus cellular response to starvation cellular response to nutrient levels cellular response to stress cellular response to nitrogen starvation response to stress cellular process response to starvation nitrogen cycle metabolic process catabolic process small molecule metabolic process cellular response to stimulus response to nutrient levels cellular response to nitrogen levels response to stimulus cellular response to starvation cellular response to nutrient levels cellular response to stress cellular response to nitrogen starvation response to stress cellular process response to starvation nitrogen cycle metabolic process catabolic process small molecule metabolic process metabolic process urea catabolic process small molecule catabolic process urea metabolic process	protein-containing complex cellular anatomical structure intracellular anatomical structure catalytic complex cytoplasm urease complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR050069	Urease subunit	Family
A, B, C	IPR012010	Urease, gamma subunit	Family
A, B, C	IPR002026	Urease, gamma/gamma-beta subunit	Family
A, B, C	IPR036463	Urease, gamma subunit superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.