solution structure of PSD-1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d2fs1a_ | All alpha proteins | immunoglobulin/albumin-binding domain-like | Bacterial immunoglobulin/albumin-binding domains | automated matches | automated matches | (Finegoldia magna ATCC 29328 ) [TaxId: 334413 ], (Streptococcus dysgalactiae ) [TaxId: 1334 ], (Streptococcus equi ) [TaxId: 1336 ], (Streptococcus canis ) [TaxId: 1329 ], (Streptococcus sp. ) [TaxId: 1306 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | GA | e2fs1A1 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Bacterial immunoglobulin/albumin-binding domains (From Topology) | T: Bacterial immunoglobulin/albumin-binding domains | F: GA | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.10.8.40 | Mainly Alpha | Orthogonal Bundle | Helicase, Ruva Protein | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF17573 | GA-like domain (GA-like) | GA-like domain | This domain is found in bacterial cell surface proteins. It is related to the GA domain that forms a three helix bundle. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| PSD-1 | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR009063 | Immunoglobulin/albumin-binding domain superfamily | Homologous Superfamily | |
| IPR020840 | Extracellular matrix-binding protein ebh, GA module | Domain | |
| IPR003147 | Protein L, Ig light chain-binding | Repeat | |
| IPR040912 | Repeat of unknown function DUF5633 | Repeat | |
| IPR002988 | Protein G-related albumin-binding (GA) module | Domain | |
| IPR035152 | GA-like domain | Domain | |
| IPR019931 | LPXTG cell wall anchor domain | Domain |














