2FQM | pdb_00002fqm

Crystal structure of the oligomerization domain of the phosphoprotein of vesicular stomatitis virus

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
F	d2fqmf_	Alpha and beta proteins (a+b)	Phosphoprotein oligomerization domain-like	Phosphoprotein oligomerization domain-like	Phosphoprotein oligomerization domain-like	Phosphoprotein P (M1)	(Vesicular stomatitis Indiana virus ) [TaxId: 11277 ],	SCOPe (2.08)
E	d2fqme2	Alpha and beta proteins (a+b)	Phosphoprotein oligomerization domain-like	Phosphoprotein oligomerization domain-like	Phosphoprotein oligomerization domain-like	Phosphoprotein P (M1)	(Vesicular stomatitis Indiana virus ) [TaxId: 11277 ],	SCOPe (2.08)
E	d2fqme3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Vesicular stomatitis Indiana virus ) [TaxId: 11277 ],	SCOPe (2.08)
D	d2fqmd2	Alpha and beta proteins (a+b)	Phosphoprotein oligomerization domain-like	Phosphoprotein oligomerization domain-like	Phosphoprotein oligomerization domain-like	Phosphoprotein P (M1)	(Vesicular stomatitis Indiana virus ) [TaxId: 11277 ],	SCOPe (2.08)
D	d2fqmd3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Vesicular stomatitis Indiana virus ) [TaxId: 11277 ],	SCOPe (2.08)
C	d2fqmc_	Alpha and beta proteins (a+b)	Phosphoprotein oligomerization domain-like	Phosphoprotein oligomerization domain-like	Phosphoprotein oligomerization domain-like	Phosphoprotein P (M1)	(Vesicular stomatitis Indiana virus ) [TaxId: 11277 ],	SCOPe (2.08)
B	d2fqmb_	Alpha and beta proteins (a+b)	Phosphoprotein oligomerization domain-like	Phosphoprotein oligomerization domain-like	Phosphoprotein oligomerization domain-like	Phosphoprotein P (M1)	(Vesicular stomatitis Indiana virus ) [TaxId: 11277 ],	SCOPe (2.08)
A	d2fqma1	Alpha and beta proteins (a+b)	Phosphoprotein oligomerization domain-like	Phosphoprotein oligomerization domain-like	Phosphoprotein oligomerization domain-like	Phosphoprotein P (M1)	(Vesicular stomatitis Indiana virus ) [TaxId: 11277 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	Phosphoprotein oligomerization domain-like	8034002	3001481	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Phosphoprotein oligomerization domain-like	8034002	3001481	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Phosphoprotein oligomerization domain-like	8034002	3001481	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Phosphoprotein oligomerization domain-like	8034002	3001481	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Phosphoprotein oligomerization domain-like	8034002	3001481	SCOP2B (2022-06-29)
A	SCOP2 Family	Phosphoprotein oligomerization domain-like	8021622	4002608	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Phosphoprotein oligomerization domain-like	8034002	3001481	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	Phosphoprotein_1st	e2fqmF1	A: a+b duplicates or obligate multimers	X: Phosphoprotein oligomerization domain-like (From Topology)	H: Phosphoprotein oligomerization domain-like (From Topology)	T: Phosphoprotein oligomerization domain-like	F: Phosphoprotein_1st	ECOD (1.6)
E	Phosphoprotein_1st	e2fqmE1	A: a+b duplicates or obligate multimers	X: Phosphoprotein oligomerization domain-like (From Topology)	H: Phosphoprotein oligomerization domain-like (From Topology)	T: Phosphoprotein oligomerization domain-like	F: Phosphoprotein_1st	ECOD (1.6)
D	Phosphoprotein_1st	e2fqmD1	A: a+b duplicates or obligate multimers	X: Phosphoprotein oligomerization domain-like (From Topology)	H: Phosphoprotein oligomerization domain-like (From Topology)	T: Phosphoprotein oligomerization domain-like	F: Phosphoprotein_1st	ECOD (1.6)
C	Phosphoprotein_1st	e2fqmC1	A: a+b duplicates or obligate multimers	X: Phosphoprotein oligomerization domain-like (From Topology)	H: Phosphoprotein oligomerization domain-like (From Topology)	T: Phosphoprotein oligomerization domain-like	F: Phosphoprotein_1st	ECOD (1.6)
B	Phosphoprotein_1st	e2fqmB1	A: a+b duplicates or obligate multimers	X: Phosphoprotein oligomerization domain-like (From Topology)	H: Phosphoprotein oligomerization domain-like (From Topology)	T: Phosphoprotein oligomerization domain-like	F: Phosphoprotein_1st	ECOD (1.6)
A	Phosphoprotein_1st	e2fqmA1	A: a+b duplicates or obligate multimers	X: Phosphoprotein oligomerization domain-like (From Topology)	H: Phosphoprotein oligomerization domain-like (From Topology)	T: Phosphoprotein oligomerization domain-like	F: Phosphoprotein_1st	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	6.10.140.830	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
E	6.10.140.830	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
D	6.10.140.830	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
C	6.10.140.830	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
B	6.10.140.830	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
A	6.10.140.830	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Phosphoprotein	RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups	-	virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR037263	Phosphoprotein, central domain	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR043036	Phosphoprotein, C-terminal domain, viral	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR048220	Phosphoprotein, C-terminal domain, vesiculovirus	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.