2FDC
Structural Basis of DNA Damage Recognition and Processing by UvrB: crystal structure of a UvrB/DNA complex
Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8039981 | 3002019 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8039982 | 3002019 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8039981 | 3002019 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8039982 | 3002019 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | Helicase_C_8 | e2fdcA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Helicase_C_8 | ECOD (1.6) |
C [auth A] | ResIII | e2fdcA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ResIII | ECOD (1.6) |
D [auth B] | UB2H_1 | e2fdcB3 | A: beta meanders | X: Colicin E3 ribonuclease domain-like | H: UvrB interaction domain (From Topology) | T: UvrB interaction domain | F: UB2H_1 | ECOD (1.6) |
D [auth B] | Helicase_C_8 | e2fdcB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Helicase_C_8 | ECOD (1.6) |
D [auth B] | ResIII | e2fdcB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ResIII | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth A] | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
D [auth B] | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
D [auth B] | 3.30.2060.10 | Alpha Beta | 2-Layer Sandwich | Penicillin-binding protein 1b fold | Penicillin-binding protein 1b domain | CATH (4.3.0) |
D [auth B] | 6.10.140.240 | Special | Helix non-globular | Helix Hairpins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], D [auth B] | PF12344 | Ultra-violet resistance protein B (UvrB) | Ultra-violet resistance protein B | - | Family |
C [auth A], D [auth B] | PF00271 | Helicase conserved C-terminal domain (Helicase_C) | Helicase conserved C-terminal domain | The Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase. | Domain |
C [auth A], D [auth B] | PF04851 | Type III restriction enzyme, res subunit (ResIII) | Type III restriction enzyme, res subunit | - | Family |
C [auth A], D [auth B] | PF17757 | UvrB interaction domain (UvrB_inter) | UvrB interaction domain | This domain is found in the UvrB protein where it interacts with the UvrA protein [2]. | Domain |